Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1500 ATGAGCTCCGAAGTGGTCCTCCACAGATTCGCCCAATCAGATCCTAAACCTAACACAGGGCCACCCAGCACCGCAGATTCCGACTCCAATGTGCAACTCTCCCACCCTCGAAAATCCTCTGCTCTATCCTCCTCTCGCTCCTCTAAAGACCGTCACACCAAGGTCAACGGTCGGGGCCGCCGTGTCCGTATGCCGCCACTCTGCGCCGCCCGAATATTCCAACTGACCCGAGAACTCGGCCACCGTTCCGACGGCGAGACAATAGAGTGGCTGCTACGCCAGGCCGAGCCATCTATCTTTGCCGCCACTGGCACCGGAACGGTTCCCGCAGAACCCGTATCCACTAGCAACACTGTGATATCGTCCTCAGCAGCCTCTGTTCCTTGTCGAGTCCACCCTGTTTCCGCGGTAGGCAGTGGGCCGGGGATGTTTGCCATGGCTTTGCCACCGCAGCCGCAGTCGAGCTGCAGATTAGATTTGTGTCAACCAATGGGAATGGAGTACGCCGCAGCCGCGGCTGCCAACGGGTACCGGAATATGCCGTTCACGGCTTTGTTGTTACAACCATCAACGGAGGAGACGGAGGAGACGCCGCAAGATGAGACTCTCAGAGAGTAA 618 0.5825 MSSEVVLHRFAQSDPKPNTGPPSTADSDSNVQLSHPRKSSALSSSRSSKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRQAEPSIFAATGTGTVPAEPVSTSNTVISSSAASVPCRVHPVSAVGSGPGMFAMALPPQPQSSCRLDLCQPMGMEYAAAAAANGYRNMPFTALLLQPSTEETEETPQDETLRE 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1500 205 ProSiteProfiles TCP domain profile. 48 102 IPR017887 -
Alju01g1500 205 MobiDBLite consensus disorder prediction 1 63 - -
Alju01g1500 205 MobiDBLite consensus disorder prediction 16 43 - -
Alju01g1500 205 Pfam TCP family transcription factor 47 126 IPR017887 -
Alju01g1500 205 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 133 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1500 Alju-ChrAlju01 12005813 12006430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1500 48 191 TCP Transcription Factor Family AT2G37000 54.483 4.74e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Alju01g1500 TCP 4.1e-29 No_clan