Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1489 ATGTCACAAAATTCTGAGGAGATAAAGACAATTGAGCACTGGAAATGGTCCGAAATGCAAGGCCTTGAGCTCGTCCCACCTGCTCCTATTGCCGACTCGACGCCGGAAAACAGAGACTCCAAAGCAGAGGAAGCGGCCAACGGAGAACCAAGGGACGACATCATGGAAAGCTCTGAGCCCAAGAAAGACGGCGGAGAGAAGCCAGACCCTGTTCATCCCGTCGGATTCGGCGAGCTTTTCAGATTCGCCGATGGATTAGATTACATTCTCATGGGAATCGGAACGATGGGGGCAATTGTGCACGGCTGTTCTCTGCCTCTGTTTCTTCGGTTTTTCGCTGATCTTGTGAATTCTTTCGGGGCCAATGCCAATGATGTGGACAAGATGACCCAAGAAGTCGTCAAGTACGCGTTTTACTTCTTGGTGGTGGGTGCTGCTATATGGGCATCATCGTGGGCAGAGATATCCTGCTGGATGTGGACAGGGGAGAGGCAGTCGACGAAAATGAGAATAAAGTACCTGGAAGCTGCGTTGAATCAGGACATTCAGTATTTTGACACCGAGGTTCGAACTTCCGATGTTGTTTATGCCATTAACACTGATGCTGTCATGGTCCAAGATGCTATTAGCGAGAAGCTGGGTAATTTCATTCACTACATGGCTACATTCGTGTCTGGATTCGTGGTGGGATTCACGGCGGTTTGGCAGTTAGCTTTAGTCACACTCGCCGTAGTCCCAATGATAGCTGTGATCGGAGGCATTCACACAGCCACGTTGGCCAAGCTCTCCGGCAAAAGCCAGCAAGCTCTCTCTCAAGCCGGCAACATAGTGGAACAGACTGTAGCGCAAATTCGAGTGGTAATGGCATTCGTGGGAGAGAGCCGGGCATTGCAAGCCTATTCGTCGGCGTTGAAAGTGGTCCAGAAGATTGGCTACAAAACTGGACTCGCTAAGGGAATGGGATTGGGTGCCACTTACTTTGTCGTTTTCTGCTGTTACGCTCTTCTCTTATGGTACGGTGGTTACCTCGTCAGGCACCACCACACCAATGGCGGACTTGCCATCGCCACCATGTTTGCTGTTATGATAGGTGGACTGGGTTTGGGTCAATCTGCTCCAAGCATGGCTGCATTTACAAAGGCCAGAGTTGCTGCTGCAAAAATTTTCCGTGTTATTGATCACAAGCCAGGGATAGAACGAAACAGTGAATCAGGCTTGGAATTAGAGTCAGTGACAGGACTAGTGGAGCTTAAAAATGTAGACTTCTCATACCCATCAAGGCCAGAGGTTCGGATTCTCAATGATTTCTCACTAGTTGTGCCTGCTGGGAAGACCATAGCCTTGGTTGGTAGTAGTGGCTCTGGCAAGAGCACCGTCGTCTCCCTCATTGAGAGATTCTATGACCCCACTTCTGGACAAGTTCTGCTTGATGGGCATGACATTAAAGCATTGAAGCTTAGATGGCTGAGGCAGCAAATAGGACTAGTAAGCCAAGAGCCTGCATTATTTGCCACCACAATTAGAGAAAATATACTGTTGGGTCGGCCAGATGCAGACCAGGTTGAGATTGAAGAAGCTGCAAGAGTAGCTAATGCTCATTCGTTCATTATCAAGCTTCCTGAAGGCTATGATACCCAGGTGGGAGAGAGGGGGCTGCAGCTTTCTGGAGGGCAAAAGCAAAGGATAGCAATTGCAAGGGCAATGTTGAAAAACCCAGCTATTCTTCTGTTGGATGAAGCAACAAGTGCCTTGGACTCTGAGTCAGAAAAGTTGGTTCAAGAAGCGCTAGACCGGTTCATGATTGGTAGAACAACTCTTGTAATTGCTCATCGCCTCTCCACTATTCGCAAAGCTGACCTTGTAGCTGTACTTCAACAAGGAAGTGTTTCTGAAATTGGAACTCATGATGAGCTCCTTTCTAAAGGTGAAAATGGAGTGTATGCCAAGCTTATTCGGATGCAGGAAGCAGCACATGAAACTGCTATGAACAATGGCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCTAGAAACTCTGTCAGCTCACCAATAATTGCTCGGAATTCTTCATATGGTCGGTCCCCATACTCACGCAGGCTGTCGGACTTCTCTACATCTGACTTTAGTCTGTCCATTGATGCACCATATCCAAATTACAGGCTTGAAAAACTTGCCTTCAAAGACCAAGCTAGTTCCTTCTGGCGACTTGCAAAAATGAACTCTCCTGAATGGCTATATGCTTTTATTGGTTCCACAGGCTCTGTTGTTTGTGGATCTCTTAGTGCCTTCTTTGCTTATGTCCTTAGTGCAGTCCTCAGTGTTTATTACAATCCGGACCACAAATTTATGATTCGAGAAATTGAGAAGTATTGCTACTTGCTGATTGGCCTTTCATCTGCTGCACTTCTCTTTAATACACTCCAGCATTTCTTCTGGGATATTGTGGGAGAAAATCTTACAAAGCGAGTAAGGGAGAAGATGCTGGCCGCTGTTCTCAAGAACGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTTGCTCTTGATGCCAACAATGTCAGATCAGCCATCGGAGATCGCATTTCAGTAATCGTTCAAAACACGGCACTTATGCTAGTTGCTTGTACCGCAGGGTTTGTTTTGCAGTGGCGCCTTGCCCTTGTCCTTGTAGCCGTATTCCCTGTTGTCGTTGCAGCAACAGTTTTACAGAAAATGTTCATGACTGGTTTCTCTGGAGACCTGGAAGAAGCTCATGCCAAGGCCACACAACTAGCAGGAGAAGCCATTGCAAATGTTAGAACTGTTGCTGCCTTCAACTCTGAAACAAAAATTGTTGGTCTTTTCACTTCTAACCTTGAAACTCCACTACGACGATGCTTTTGGAAGGGACAGATTTCTGGAAGTGGGTTTGGGATAGCTCAGTTTGCACTTTATGCTTCCTATGCACTTGGTTTGTGGTATGCTTCTTGGCTTGTGAAGCACGGAATCTCAGATTTCTCTAAAACAATCAGGGTCTTTATGGTCCTCATGGTTTCTGCCAATGGTGCTGCTGAAACTTTAACCCTGGCACCTGACTTTATCAAGGGAGGTCGAGCTATGAAGTCAGTCTTTGATCTCCTTGACCGAAGAACCGAAATTGAACCAGATGACCCAGATGCTATTCCTGTCCCCGACCATGTTCGTGGTGAAGTTGAACTTAAGCATGTTGACTTCTCATATCCCACTCGCCCCGATATGCCAGTATTTCGCGACCTGAATCTTCGCGCTAGAGCCGGAAAAGCCCTTGCCCTTGTTGGACCTAGTGGCTGTGGTAAGAGCTCAGTCATTGCACTAATACAAAGATTCTATGATCCAACATCTGGGAGAGTGATGATTGATGGAAAGGACATTAGAAAATACAATCTCAAGTCTCTGAGGAGGCACATTGCGGTGGTACCTCAAGAGCCTTGTCTATTTGCTGCTACTATATACGAAAACATTGCATATGGGCATGAATCAGCCGCAGAATCTGAGATAATAGAAGCAGCAACACTTGCCAATGCCCACAAATTCATATCAGCTTTGCCTGATGGATACAAAACGTTTGTGGGGGAGAGAGGAGTTCAGCTATCAGGAGGGCAAAAGCAGAGAATAGCGATCGCTCGGGCTTTCCTGAGAAAGGCCGAGGTGATGCTTCTAGATGAAGCAACAAGTGCACTTGATGCTGAGTCTGAGAGGTCTGTTCAGGAGGCTCTGGACCGTGCATGTTCTGGAAAAACAACCATTATTGTTGCTCATAGGCTATCAACTATTAGGAATGCTAGTCTTATTGCAGTGATTGATGATGGGAAAGTGGCAGAGCAAGGATCTCACTCACATTTGCTGAAAAATCACCCAGATGGGATCTATGCACGAATGATTCAGTTACAAAGGTTTACACACAGTCAAGTGGTTGAGATGACCTCGGGTTCAAGTTCTTCTGCAAGACCAAAAGATGGTGAAAGAGAAAGCTAG 4011 0.4665 MSQNSEEIKTIEHWKWSEMQGLELVPPAPIADSTPENRDSKAEEAANGEPRDDIMESSEPKKDGGEKPDPVHPVGFGELFRFADGLDYILMGIGTMGAIVHGCSLPLFLRFFADLVNSFGANANDVDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRIKYLEAALNQDIQYFDTEVRTSDVVYAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPMIAVIGGIHTATLAKLSGKSQQALSQAGNIVEQTVAQIRVVMAFVGESRALQAYSSALKVVQKIGYKTGLAKGMGLGATYFVVFCCYALLLWYGGYLVRHHHTNGGLAIATMFAVMIGGLGLGQSAPSMAAFTKARVAAAKIFRVIDHKPGIERNSESGLELESVTGLVELKNVDFSYPSRPEVRILNDFSLVVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQVLLDGHDIKALKLRWLRQQIGLVSQEPALFATTIRENILLGRPDADQVEIEEAARVANAHSFIIKLPEGYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELLSKGENGVYAKLIRMQEAAHETAMNNGRKSSARPSSARNSVSSPIIARNSSYGRSPYSRRLSDFSTSDFSLSIDAPYPNYRLEKLAFKDQASSFWRLAKMNSPEWLYAFIGSTGSVVCGSLSAFFAYVLSAVLSVYYNPDHKFMIREIEKYCYLLIGLSSAALLFNTLQHFFWDIVGENLTKRVREKMLAAVLKNEMAWFDQEENESARIAARLALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEEAHAKATQLAGEAIANVRTVAAFNSETKIVGLFTSNLETPLRRCFWKGQISGSGFGIAQFALYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANGAAETLTLAPDFIKGGRAMKSVFDLLDRRTEIEPDDPDAIPVPDHVRGEVELKHVDFSYPTRPDMPVFRDLNLRARAGKALALVGPSGCGKSSVIALIQRFYDPTSGRVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFAATIYENIAYGHESAAESEIIEAATLANAHKFISALPDGYKTFVGERGVQLSGGQKQRIAIARAFLRKAEVMLLDEATSALDAESERSVQEALDRACSGKTTIIVAHRLSTIRNASLIAVIDDGKVAEQGSHSHLLKNHPDGIYARMIQLQRFTHSQVVEMTSGSSSSARPKDGERES 1336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1489 1336 CDD ABC_6TM_Pgp_ABCB1_D1_like 91 388 - -
Alju01g1489 1336 FunFam ABC transporter B family member 1 78 413 - -
Alju01g1489 1336 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1070 1306 IPR003439 GO:0005524
Alju01g1489 1336 MobiDBLite consensus disorder prediction 36 69 - -
Alju01g1489 1336 SUPERFAMILY ABC transporter transmembrane region 79 399 IPR036640 GO:0005524|GO:0016020
Alju01g1489 1336 FunFam ABC transporter B family member 1 405 655 - -
Alju01g1489 1336 SUPERFAMILY ABC transporter transmembrane region 734 1057 IPR036640 GO:0005524|GO:0016020
Alju01g1489 1336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1061 1309 IPR027417 -
Alju01g1489 1336 Pfam ABC transporter transmembrane region 92 365 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g1489 1336 Pfam ABC transporter transmembrane region 752 1017 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g1489 1336 Gene3D - 413 678 IPR027417 -
Alju01g1489 1336 SMART AAA_5 1097 1289 IPR003593 GO:0016887
Alju01g1489 1336 SMART AAA_5 442 628 IPR003593 GO:0016887
Alju01g1489 1336 MobiDBLite consensus disorder prediction 658 679 - -
Alju01g1489 1336 FunFam ABC transporter B family member 1 726 1035 - -
Alju01g1489 1336 CDD ABC_6TM_Pgp_ABCB1_D2_like 736 1052 - -
Alju01g1489 1336 MobiDBLite consensus disorder prediction 1317 1336 - -
Alju01g1489 1336 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 415 651 IPR003439 GO:0005524
Alju01g1489 1336 Gene3D - 1061 1317 IPR027417 -
Alju01g1489 1336 CDD ABC_MTABC3_MDL1_MDL2 415 654 - -
Alju01g1489 1336 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 747 1034 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g1489 1336 MobiDBLite consensus disorder prediction 25 71 - -
Alju01g1489 1336 ProSitePatterns ABC transporters family signature. 1209 1223 IPR017871 GO:0005524|GO:0016887
Alju01g1489 1336 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 93 380 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Alju01g1489 1336 FunFam ABC transporter B family member 19 1036 1058 - -
Alju01g1489 1336 Pfam ABC transporter 1089 1237 IPR003439 GO:0005524
Alju01g1489 1336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 406 654 IPR027417 -
Alju01g1489 1336 FunFam ABC transporter B family member 1 1061 1310 - -
Alju01g1489 1336 MobiDBLite consensus disorder prediction 661 679 - -
Alju01g1489 1336 PANTHER ABC TRANSPORTER B FAMILY 56 759 IPR039421 -
Alju01g1489 1336 Pfam ABC transporter 433 582 IPR003439 GO:0005524
Alju01g1489 1336 ProSitePatterns ABC transporters family signature. 554 568 IPR017871 GO:0005524|GO:0016887
Alju01g1489 1336 Gene3D ABC transporter type 1, transmembrane domain 138 1043 IPR036640 GO:0005524|GO:0016020
Alju01g1489 1336 CDD ABC_MTABC3_MDL1_MDL2 1070 1309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1489 Alju-ChrAlju01 11919798 11925502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1489 62 1331 Calmodulin-binding Proteins AT2G36910 87.997 0.0 2310