Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1472 ATGCCGGTCAGAAACATCGCCGTTGGTAGGCCTGAGGAGGCCACTCACCCGGATACCTTGAAGGCCGGGTTGGCCGAGTTCATCTCCACCCTCATCTTCGTCTTCGCCGGTTCAGGCTCCAGCATGGCCTTCAACAAAATCACCAATAACGGTGCCACCACCCCCGCCGGCCTCATCTCCGCCTCCATCGCCCACGCCTTCGCTCTGTTTGTTGCCGTCTCCGTTGGCGCAAACATCTCCGGCGGCCACGTCAACCCCGCTGTCACCTTCGGAGCCTTCGTCGGAGGTAACATCAGTTTGTTGCGAGGCATCGTCTACTGGATCGCTCAGCTTCTCGGTTCGATCGTTGCCTGCGCGCTCCTCAAGTTCGTCACCGGAGGACTGACTACACCGGCTTTTGCACTGTCTGCGGGAGTTGGAGTATGGGAGGCGGTGGTGTTCGAGATAGTGATGACATTCGGCTTGGTGTACACGGTGTACGCGACAGCCATTGATCCGAAGAAGGGCAATTTGGGAGTGATAGCACCCATCGCGATCGGTTTCATCGTGGGGGCAAACATTCTGGCGGGTGGAGCCTTCGATGGGGCATCCATGAACCCGGCAGTGTCATTCGGACCTGCCGTGGTGAGCTGGAGCTGGGACAACCACTGGGTCTATTGGCTCGGACCACTTATTGGCGGTGGGCTCGCCGGCGTCATCTATGAGGTCATCTTCATCTCCCACACCCACGAGCAGCTCCCCTCCACTGATTACTAA 756 0.5873 MPVRNIAVGRPEEATHPDTLKAGLAEFISTLIFVFAGSGSSMAFNKITNNGATTPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLRGIVYWIAQLLGSIVACALLKFVTGGLTTPAFALSAGVGVWEAVVFEIVMTFGLVYTVYATAIDPKKGNLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSWSWDNHWVYWLGPLIGGGLAGVIYEVIFISHTHEQLPSTDY 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1472 251 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Alju01g1472 251 PANTHER AQUAPORIN-8 6 246 IPR034294 -
Alju01g1472 251 SUPERFAMILY Aquaporin-like 12 246 IPR023271 -
Alju01g1472 251 NCBIfam MIP family channel protein 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1472 251 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1472 251 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1472 251 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1472 251 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1472 251 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1472 251 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1472 251 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1472 251 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Alju01g1472 251 FunFam Probable aquaporin TIP1-1 4 251 - -
Alju01g1472 251 Gene3D Glycerol uptake facilitator protein. 4 251 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1472 Alju-ChrAlju01 11781978 11782880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1472 1 251 Major Intrinsic Protein MIP AT2G36830 82.470 1.14e-151 421