Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1454 ATGAAGCAAGAATTGGAACCGGAGATTCAGTCTCTGAATCAAGGTGATGAAGTCGTTCCTTCTCCATCTTCTGAAATTGACGCTTGTTCAGAGTCTCAGTTAATGTTTTCTTTGCATGTTTCTGAGAATCCCGACGGTATAGTTAAAAGTTCTGTCGTAAATGGTTATCATGTTTATACTCGAACAAAGAAGTCTCGGCATTTGCGCAATGCGTCTTCTGAGAACGGTTCACTTAAGAGACTCAAGACCTCTAAAGATCGGGAGCCAAATGAAGACCTTCCAGCTGTTGGTGGCGGAGATGAAGTAGAGCTAAACAATGTAGAAAAAAATATCGAATCTGAAGTCGTTTGCCATTTGGAAAAGCCAATTGCGTGTACTGAATTGAAGATCGAGCCCGCGCAGTTTCTTGCTGGGGAAGGTGGCTCCAATAAGGTTCCTGCCGAACCTTTTAACAGTGAGGTACAGAGAAATGCAGATAAAACAGTGAAGCGGTTTACGCGATCAGCCTTGAAACCAAAGGTTGAATGCACTGATGAGGCGGGGATTGCTCCAGAAGCTGCTCGGACAACAAATAATATATCAGTTGAGAAAGAGACCGCTGCTCTAAGTGCATCAACAACTCGGCGAAATAAGTTGGAGCTGAAAATGTCCAAGAAGATTGTGCTCAGCAAGAAGCCTATGACTGTCAAGGAACTATTCGATACTGGTTTACTGAATGGGGTTTCAGTAGTTTATATGGGCGGCAAGGCTTCTGGCCTGCGGGGTGTTATTACAGATGGGGGGATCTTGTGCTCTTGTTGTCTGTGCAGTGGGCGCAAGGTTATTCCACCTTCCCAATTCGAGATTCATGCTTGCAAATCATATAAGCGAGCAGCACAGTATATTTGCTTTGAAAACGGAAAGAGCCTGCTTGAATTATTGAGAGCATGCAGAAGAACTTCGCTGCATTCATTGGAGACGGCAATTCAAAACGTTGTTTGTTCTCCACCTCAAGAGAAATATTTTACATGTAAAAGGTGCAAAGGGTGTTTTTCCTCTTCACGAGCGGAAAAAGTAGGGCCTATATGTAAAGCTTGTTTGGAATCAAAGGAATCCGAAGGCAGTTTAATTGACGCAGTTGGCAAAAGAGTCAGGTCTCCCAGACCAGTTCCAACCACCAAACCGTTAATTGATTCTGAGCTGTGTAACTTCTCACAAACTAACAAACATTGGAAGAAAAGAACAAGGACAACAAATCGGGTTAGCAGCTCAAAGTCTTCCGAGGCTGCTTCTGTGCCCATCCTATCACGAAAGAAGCCTCTGCAGAGGCCAACAAAAACTTCAGTAAGACTGAAGACCACACTAATTTCATCAAACTCAAAGTGTTTATCTTCACAAAATAAGAGTCAATGGAAGATAACTAAAAAGGATCAGCGGTTACATAAATTAGTTTTTGAAGAAGGTGGATTGCCTGATGGAACAGAAGTGGCTTATTACGGACGTGGACAGAAATTGCTCGAGGGTTACAAAAAGGGCTTTGGAATACTTTGTCGGTGCTGCAACACCCAGGTCAGCCCATCACAATTTGAGGTCCATGCAGGCTGGGCTTCTCGCAGGAAACCTTATGCATACATCTACACTTCAAATGGGGTTTCTCTCCATGAACTAGCAATTTCTCTTTCAAAAGGCCGCAAGTACTCTTCAAAGGACAATGATGATCTTTGCATTATTTGTTGGGATGGTGGAAATCTGTTGCTTTGTGATGGATGCCCAAGGGCATTTCATAAAGAATGCGCATCTCTATCAAGCATTCCACGTGGTGACTGGTACTGTAAGATTTGCCAAAACATGTTCCAGAGGGAAAGATTTGTAGCACACAATGCCAATGCTGTGGCTGCTGGAAGGATTGACGGGGTTGATCCTATTGAACAGATAACCACAAGATGCATTCGCATTGTCAAAGACATTGAAGCTGAGCTGAGCGGCTGTGCTTTATGCAGGGGTTATGACTTCAGCAAGGCAGGATTTGGTCCTCGCACAATTATACTCTGCGACCAGTGTGAAAAGGAATATCATGTAGGCTGTTTGAGGGATCATAAGATGGCATATTTGAAGGAATTGCCAGAAGGAAATTGGTTTTGTTGCACAGATTGCAACAGAATACATTCTACTCTGCAGAAGTTCTTGATCAGGGGGTCTGAGAAACTTCCTGACTCTCTTGTGGATGTTATAAAGACAAAACAAGAGGAAAACGGTTTGCAATCTTTCAATGATATTGATGTAAGATGGAGGCTTCTTAATGGCAAAATTGCTTCTCCTGAGACCAGGCCATTGCTGTCAGATGTTGTTTCAATCTTTCATGAATGCTTTGATCCTATAGTTGATTCAACTAGTAGACGTGACCTTATCCCAGCCATGGTTTATGGAAGGAATGTGCGGAGTCAAGAGTTTGGAGGAATGTATTGTGCAATATTATTGGTCAATTCAACTGTTGTATCAGCTGGCATGCTTCGAATTTTTGGTAAAGATGTGGCCGAACTTCCTTTAGTTGCAACAAGCAATGGCAATCATGGAAAGGGCTACTTCCAATTACTCTTCACCTGCATTCAGAGACTGCTGGCGCTGTTGAACGTAAAGATGCTTGTGCTACCAGCTGCTGAAGAAGCAGAATCCATATGGACAGATAAATTTGGGTTCCACAAGATGAAACCAGAGCAGATTAGTAACTGCAGAAAGAACTACAGTCAGCTGGTGACATTCCAAGGGACATCCATGCTTCAAAAAATGGTTCCGCCCTGTCAAGTCTTCAATGGGAAAGAGGAAGATTCGTAG 2811 0.4315 MKQELEPEIQSLNQGDEVVPSPSSEIDACSESQLMFSLHVSENPDGIVKSSVVNGYHVYTRTKKSRHLRNASSENGSLKRLKTSKDREPNEDLPAVGGGDEVELNNVEKNIESEVVCHLEKPIACTELKIEPAQFLAGEGGSNKVPAEPFNSEVQRNADKTVKRFTRSALKPKVECTDEAGIAPEAARTTNNISVEKETAALSASTTRRNKLELKMSKKIVLSKKPMTVKELFDTGLLNGVSVVYMGGKASGLRGVITDGGILCSCCLCSGRKVIPPSQFEIHACKSYKRAAQYICFENGKSLLELLRACRRTSLHSLETAIQNVVCSPPQEKYFTCKRCKGCFSSSRAEKVGPICKACLESKESEGSLIDAVGKRVRSPRPVPTTKPLIDSELCNFSQTNKHWKKRTRTTNRVSSSKSSEAASVPILSRKKPLQRPTKTSVRLKTTLISSNSKCLSSQNKSQWKITKKDQRLHKLVFEEGGLPDGTEVAYYGRGQKLLEGYKKGFGILCRCCNTQVSPSQFEVHAGWASRRKPYAYIYTSNGVSLHELAISLSKGRKYSSKDNDDLCIICWDGGNLLLCDGCPRAFHKECASLSSIPRGDWYCKICQNMFQRERFVAHNANAVAAGRIDGVDPIEQITTRCIRIVKDIEAELSGCALCRGYDFSKAGFGPRTIILCDQCEKEYHVGCLRDHKMAYLKELPEGNWFCCTDCNRIHSTLQKFLIRGSEKLPDSLVDVIKTKQEENGLQSFNDIDVRWRLLNGKIASPETRPLLSDVVSIFHECFDPIVDSTSRRDLIPAMVYGRNVRSQEFGGMYCAILLVNSTVVSAGMLRIFGKDVAELPLVATSNGNHGKGYFQLLFTCIQRLLALLNVKMLVLPAAEEAESIWTDKFGFHKMKPEQISNCRKNYSQLVTFQGTSMLQKMVPPCQVFNGKEEDS 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1454 936 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 811 897 IPR016181 -
Alju01g1454 936 MobiDBLite consensus disorder prediction 79 94 - -
Alju01g1454 936 ProSiteProfiles Zinc finger PHD-type profile. 565 610 IPR019787 -
Alju01g1454 936 CDD PHD1_AIRE 567 607 - -
Alju01g1454 936 SMART PHD_3 655 712 IPR001965 -
Alju01g1454 936 SMART PHD_3 567 608 IPR001965 -
Alju01g1454 936 ProSitePatterns Zinc finger PHD-type signature. 568 607 IPR019786 -
Alju01g1454 936 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 554 635 IPR013083 -
Alju01g1454 936 MobiDBLite consensus disorder prediction 64 99 - -
Alju01g1454 936 Pfam Tify domain binding domain 255 310 IPR032308 -
Alju01g1454 936 Pfam Tify domain binding domain 501 551 IPR032308 -
Alju01g1454 936 Coils Coil 934 936 - -
Alju01g1454 936 PANTHER AUTOIMMUNE REGULATOR 74 922 - -
Alju01g1454 936 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 652 714 - -
Alju01g1454 936 SUPERFAMILY FYVE/PHD zinc finger 554 609 IPR011011 -
Alju01g1454 936 SUPERFAMILY FYVE/PHD zinc finger 646 711 IPR011011 -
Alju01g1454 936 MobiDBLite consensus disorder prediction 1 26 - -
Alju01g1454 936 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 652 714 IPR013083 -
Alju01g1454 936 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 554 631 - -
Alju01g1454 936 Pfam PHD-finger 568 609 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1454 Alju-ChrAlju01 11532845 11542490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1454 48 930 PHD Transcription Factor Family AT2G36720 46.186 0.0 806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1454 01 11532845 11542490 Alju03g2560 03 52007354 52009674 CCT
Alju03g3132 03 55976225 55979473 Alju01g1454 01 11532845 11542490 CCT