Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1443 ATGAGCAGCAGCAGCAACAACGCTGAATCACAAGCCCATGTAGGCTACTTTGTGAACCCTCTCATCATCTCTGGCGCCGGAATCATCTGCTCCTGCGTCGCCTTAGCCACATACCACTTCATCCTCTTTAGGCTCTGCCTTCAAAGCCGACGGCGATTGCAGCATATGGCGGCTCACCCAATAAGTCCTCCGGCCGATGACATTCACTGCGGCGTCGACCCTGAAGTCCTCAAGAAAATCCCAATTCTGCCTTACTCTCACAAAAAAGGTGGCGTCTTTCGATTGGACCAAACTGAATGCGCTATTTGCTTAGGTGAATTGCTTGAAGGAGAAAAGGTTCGATTATTGCCTTCTTGTTGCCATGCTTTTCACATAGCTTGTATTGATCTCTGGTTCGATCAAAATTCCAATTGTCCCATTTGTCGAGCCCCCTTAATTAGTCCCCCTCAGCAGCCGCCGCCGGTGGCGGCTTCAGAAACTACTGTTGCTGATGCTGAAGGAATAAGGGTGGTGTCAACAGTGTCTCGTGTTCAAAGTGACCGTAACATTGTTGCTTCTTCCGGTTCGACGACTTCGCGATCCCTTCTCGGCGGCGTCACCACGCTTCAGCACACTCTGTTATCTGTGTCGTATCGTCACGAGCAGGAGAAGCCTCTGGATTCGATGACGGGGATGAGGAGGTCTCTGTCCATGGATCATTCGCCGTATGTTTCTATCTGCATACAGAGAGACGAGGAACATAATAAAGCAGCTGCTTCTTCTTCTTCATCGTCTTCTTCGCCGTCTGTGGCTGCAGGGATTGGGATTGCACATGCTAAAGCCATTGATCAGGTTTCGTCCATGTTGATGATGTCTTTCGCGCAGTTTCGTAATAGTAGAAATGACAGATCCAAAGGCATTCTACCAAACTGA 912 0.4945 MSSSSNNAESQAHVGYFVNPLIISGAGIICSCVALATYHFILFRLCLQSRRRLQHMAAHPISPPADDIHCGVDPEVLKKIPILPYSHKKGGVFRLDQTECAICLGELLEGEKVRLLPSCCHAFHIACIDLWFDQNSNCPICRAPLISPPQQPPPVAASETTVADAEGIRVVSTVSRVQSDRNIVASSGSTTSRSLLGGVTTLQHTLLSVSYRHEQEKPLDSMTGMRRSLSMDHSPYVSICIQRDEEHNKAAASSSSSSSSPSVAAGIGIAHAKAIDQVSSMLMMSFAQFRNSRNDRSKGILPN 303
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1443 303 CDD RING-H2_EL5-like 99 142 - -
Alju01g1443 303 PANTHER RING-H2 FINGER PROTEIN ATL16 12 301 IPR044600 GO:0016567|GO:0016740
Alju01g1443 303 SMART ring_2 100 141 IPR001841 -
Alju01g1443 303 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Alju01g1443 303 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 147 IPR013083 -
Alju01g1443 303 Pfam Ring finger domain 99 142 IPR001841 -
Alju01g1443 303 SUPERFAMILY RING/U-box 94 153 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju01g1443 Alju-ChrAlju01 11428108 11429019 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1443 21 152 C3H Transcription Factor Family AT1G04360 32.903 6.01e-23 95.9