Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1442 ATGTCGGTGCCTCCGTGGCTTGAGCCCTTACTAACCACTTCCTTCTTCAGCGTCTGCCGCTTCCACGGCGACGCCGCCAGGAGCGAGTGTAATATGTTCTGTCTTGACTGTAATCGCAACGCATTTTGCTTCTATTGCCGTTCCTCCAGACACAAGGACCATCAGGTCATTCAGATAAGGCGATCTTCGTATCACGATGTGGTGAGAGTATCTGAGATTCAGAAGGTGTTGGACATAAGTGGGGTTCAGACGTATGTGATAAACAGCGCCAGGGTGCTGTTCCTGAACGAGAGGCCTCAGCCAAAATCTGGGAAAGGAGTAGCTCACATTTGTGAGATTTGCGGAAGAAGCCTCTTGGACCCATTCCGCTTCTGTTCTTTGGGCTGTAAGCTTGTGCGAGTGAGGAGAAATGGGGACGCAAGCTTTGCTTTGGAGGGAAACAACAACAACGAGGCAATGGAGGGAATATCAAGGAGGATATCAGTTTCAGTATCTGAAGAAGAATCGCGTGAAGGCTCACAACAAGACATGTATCCGGCCACGCCTCCTCCACCTGCTCTTGCAGCTTCAACCGCAAGAAGAAGAAAAGGCATTCCTCACAGGGCTCCTTTTGCCTCCTAA 621 0.504 MSVPPWLEPLLTTSFFSVCRFHGDAARSECNMFCLDCNRNAFCFYCRSSRHKDHQVIQIRRSSYHDVVRVSEIQKVLDISGVQTYVINSARVLFLNERPQPKSGKGVAHICEICGRSLLDPFRFCSLGCKLVRVRRNGDASFALEGNNNNEAMEGISRRISVSVSEEESREGSQQDMYPATPPPPALAASTARRRKGIPHRAPFAS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1442 206 Pfam PLATZ transcription factor 60 131 IPR006734 -
Alju01g1442 206 MobiDBLite consensus disorder prediction 163 206 - -
Alju01g1442 206 SUPERFAMILY B-box zinc-binding domain 17 61 - -
Alju01g1442 206 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1442 Alju-ChrAlju01 11424734 11425969 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Alju01g1442 PLATZ 9.8e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1442 01 11424734 11425969 Alju03g2552 03 51958071 51959191 CCT
Alju01g1442 01 11424734 11425969 Alju01g1442 01 11424734 11425969 ECH