Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1423 ATGACAAAAACTGTGGGTCGATCTTCCAGAGCTGTAAGAAACCAACCAAAACCATGGGCAGTTTCTTTTCTTCTGTCACTCCTACCGCCCCTCCCCTACACAAAACCGCTTCTGTCTGTCTTTCTATCTTATACTATGTACCACTACTATCCTCTATCCACCCCATCGTCGCCTTCCTCGGATTTGTCTCCTTCTCGAATCCTTCAAGAATCTCAAGCAGTAAAAGCTGCAATCTTTCTGGGCCTTGGCTCAAATATCATATTCATGCCTGCCTCCCTACTGGCAATTCTGAAGTGTTCTTGGGATATTTGTAAATTAGTTGTTTTTAAGCTATTGTTGATGGAACCCAATGGAATAGGTGGTGGTGGAATGTTTTCTGGTATCAGTACTGGGTTGCTCGGAGTAGAAAACCAGTTACAGAAGCAGCAACAAAACCTGTCTAATCCTCAAAATCCTCATCCTATGCATCATTCTCAAATGGTTTCTTACGCTTCTTCCCACCATGAAACTGATATTCCTCAACTACCGTCTCAACAATCGATCAAGCATGGCTACCCTTTTTCAGCGAAGATCAATCAACAAATGGCTCTCAGTGACGAGGATGAAGCAGGTTTCGCAGCAGAGGACAACGTCAGCTCTGGTGGTAAGAGGAAAATATCGCAGTGGCACAGAATGAAGTGGACGGACACTATGGTTAAGCTCCTGATAATGGCGGTTTATTACATTGGCGATGAAGGTGGCTCAGAAGGGGTTGATAAGAAGAAACCAACTGGTGGTCTGTTGCAGAAGAAAGGAAAGTGGAAATCGGTGTCAAGGGCAATGACGGAAAAAGGGTTTTTTGTGTCTCCTCAACAATGCGAGGACAAGTTTAATGATTTGAATAAGAGGTACAAGAGAGTGAACGATATTCTGGGTAAAGGAACAGCTTGCCTGGTGGTGGAAGATCACAGCTTGTTGGAGACAATGGACTTATCGCCAAAAAGGAAAGAGGAAGTTCGAAAGTTGCTCAATTCTAAGCACCTTTTCTTCAGGGAAATGTGTGCTTACCACAATAGTTGCGGCCACGGCACCACCGGCGGGCCGCCGCAACAATCCCCTGAGGTGGGAACAGAGCCATCTCAAGCAACTCAACCACAACAGCAACAACTTTGTTCACACTCATCAGAAGTTGGGATGGCGAAATTGGGTAAGTCAGAATCAGAGAGACTCAAGATTTCAAAAGAGGCAAGCAGGGAAGAAGATGAAGATGACGACGAAGATGAAGAGTCAGAGGATTCTTCTGAAGAGGAAGAAGAAGAGTCAGGGGAAGGTGTTTCGAGGGCTCTTAAAACAGGGAACACACATGAAGACGAGGATGAGAATTATGAAGGAAGACCATCATCGATGAAGAGAGCGAGAAAGGAAGAAATGTGTTCGTCGTTGCCGTCTAAGGCAATGCAGGAAACGAGCAATGAAGTGATGGGAGTGTTGCAAGATGGAGGGAGAAGCGCGTGGGAGAAGAGGCAGTGGATGAAGAGGAAAGTGATGCAATTGGAGGAACAGCAACTGAGGTACGAGGTAGAAGCATTTGAGCTGGAGAAGCAGAGGCTGAAATGGGCGAGATTTAGCAGCAAGAAAGAGAGGGAAATGGAGAGAGCTAAGCTTGAGAATCAAAGGAGGCTGCTTGAGAATGAGAGATTGGTTTTGCTATTACGCCAGAAGGATCTTGAGCTGTTGACTCAATCTTCACCGTCGCCAACTAAGGAGGCGGCGGCGGCGGCATTCTTTTAG 1770 0.4605 MTKTVGRSSRAVRNQPKPWAVSFLLSLLPPLPYTKPLLSVFLSYTMYHYYPLSTPSSPSSDLSPSRILQESQAVKAAIFLGLGSNIIFMPASLLAILKCSWDICKLVVFKLLLMEPNGIGGGGMFSGISTGLLGVENQLQKQQQNLSNPQNPHPMHHSQMVSYASSHHETDIPQLPSQQSIKHGYPFSAKINQQMALSDEDEAGFAAEDNVSSGGKRKISQWHRMKWTDTMVKLLIMAVYYIGDEGGSEGVDKKKPTGGLLQKKGKWKSVSRAMTEKGFFVSPQQCEDKFNDLNKRYKRVNDILGKGTACLVVEDHSLLETMDLSPKRKEEVRKLLNSKHLFFREMCAYHNSCGHGTTGGPPQQSPEVGTEPSQATQPQQQQLCSHSSEVGMAKLGKSESERLKISKEASREEDEDDDEDEESEDSSEEEEEESGEGVSRALKTGNTHEDEDENYEGRPSSMKRARKEEMCSSLPSKAMQETSNEVMGVLQDGGRSAWEKRQWMKRKVMQLEEQQLRYEVEAFELEKQRLKWARFSSKKEREMERAKLENQRRLLENERLVLLLRQKDLELLTQSSPSPTKEAAAAAFF 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1423 589 MobiDBLite consensus disorder prediction 142 177 - -
Alju01g1423 589 MobiDBLite consensus disorder prediction 412 435 - -
Alju01g1423 589 MobiDBLite consensus disorder prediction 395 411 - -
Alju01g1423 589 Coils Coil 538 565 - -
Alju01g1423 589 Coils Coil 508 528 - -
Alju01g1423 589 MobiDBLite consensus disorder prediction 356 388 - -
Alju01g1423 589 MobiDBLite consensus disorder prediction 443 471 - -
Alju01g1423 589 MobiDBLite consensus disorder prediction 354 482 - -
Alju01g1423 589 Gene3D - 227 299 - -
Alju01g1423 589 PANTHER F16F4.11 PROTEIN-RELATED 121 574 - -
Alju01g1423 589 Pfam Myb/SANT-like DNA-binding domain 224 348 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1423 Alju-ChrAlju01 11299157 11301036 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju01g1423 Myb_DNA-bind_4 1.8e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1423 01 11299157 11301036 Alju01g1423 01 11299157 11301036 ECH