Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1420 ATGAACAAGCCTTATGCATTAAACCTGGCTTTTGCCTTCGCCTTCACTCTGGCTTTCCTCTGTTTCGCAACGTCTCTGTGTTTAGCTCAGAATGACACCCTAGTGCTCACTCTGTTCCGCATCCAGACCGACGCTCATGGCTATCTCCTCTCTAATTGGACCGGAAGCGACCCCTGCTCCGCCACGTGGCGCGGCGTATATTGCTCCTCCAACGGCCGAGTCGTCGCACTTTCTCTCCCTTCCCTCAATCTCCGAGGACCTATTGACTCACTCTCATCGCTGGAGCACCTCCGTTTACTCGACCTCCATGACAATCGTTTAAACGGCAGCATTGCGCCTCTCTCCAACTGTACCCGCCTCAGGCTACTTTACCTCTCCCACAACGACTTCTCCGGCGAGATTCCGTCTGGAATAGCATCTCTTAAGCATCTACTGAGGCTTGACCTTTCTGACAACAACATTCACGGTCCAATTCCCAACGAACTCTCTTCCTTAACTCACCTTCTCACGCTTCGCCTACAGAACAATGTGCTCTCTGGTCAAGTTCCGGATCTCTCTGTTTCGCTCGTTAATCTCACAGAGCTCAATTTCACCAACAACGAGCTCTACGGACGCTTACCCGATGCAATGTTGAAGAAATTCGGCGACAAAACCTTCTCTGGGAATGAAGGTTTGTGTGGATCAACCCCATTCCCGGCTTGTTCCTTCACAGGGAGCCCTCCTTCTTCTGCATCACCGCACCAGATAGTTCCTTCGAACCCTAGTTCGTTGCCTGAATCTCAAACAAGCGTAATTGTCAATCCCAAAACCCAACGGCGAAAGGGATTAAGCCCCGGAGCTATAGTAGCCATAGTGGTGGCGAATTGCGTGGCATTGTTGGTGGTAACATCTTTCATAGTGGCTCACTGTTGCGCAAGAGGACGAAGCTCAAACTCGATGGTGGGTAGTGAAAATGGGAAGAGAAAAAGCGGCAGTAGTGGCTCTGGAAGCGAGAAGAAGGGGCACGCCAATAACGGTGGAGCAGATAGCGATGGGACTAGCGGCACAGACCGAAGCAGGCTTGTGTTCTTCGATCGGAGGAATCAATTCGAGCTGGAGGAATTGCTCCGAGCATCGGCGGAGATGCTTGGAAAAGGCAGCTTGGGGACAGTTTACAAGGCTGTGCTTGATGATGGTTCTTCGGTGGCGGTTAAGAGGCTTAAGGACGCAAACCCATGCGCCAGGAATGAGTTCGAGCAGTACATGGACATCATCGGAAAGGTCAAGCACCCCAACATTGTCAGATTCAGAGCATATTACTACGCCAAAGAAGAAAAACTTCTAGTCTACGACTATCTCCCTAACGCAAGCTTGCATTCTCTTCTTCATGGAAATCGAGGTCCAGGAAGAATTCCACTAGATTGGACCACAAGAGTAAGCTTGGTGTTAGGTGCAGCAAGAGGACTGGCTCGTATTCATGCAGAGTACAATGCAGCAAAAATACCTCACGGAAACGTCAAATCTTCGAACGTGCTTCTCGACAAAAACGGCGTCGCTTGCATCTCCGACTTTGGCTTGTCCCTATTACTGAACCCTGCTCACGCCATTGCAAGATTGGGCGGATACAGAGCTCCAGAACAAGAACAAGTCAAGAGACTGTCTCAGCAAGCAGACATATACAGTTTCGGAGTCTTACTACTGGAAGTTCTCACAGGGAGAGCTCCGTCGCAGCATCCTTCACCGGCTCGACCTCGCGCCGACGAAGATGAACAAGACGTGGATCTTCCGAAATGGGTTCGATCTGTTGTGAAGGAAGAGTGGACAGCAGAAGTGTTTGATCAAGAACTCTTGCGGTACAAGAACATAGAGGAAGAGCTGGTTTCAATGTTGCATGTGGGGTTGGCTTGTGTGGCTTCACAGCCAGAGAATAGGCCAACCATGGCAGAAGTAGCTAAGATGATTGAGGAGATAAGGGTGGAACAATCTCCATTAGCAGAGGACTATGATGAATCGCGTAATTCACTTTCACCGTCCCTTGCCACCACTGAAGATGGCCTTCCTTGA 2043 0.5022 MNKPYALNLAFAFAFTLAFLCFATSLCLAQNDTLVLTLFRIQTDAHGYLLSNWTGSDPCSATWRGVYCSSNGRVVALSLPSLNLRGPIDSLSSLEHLRLLDLHDNRLNGSIAPLSNCTRLRLLYLSHNDFSGEIPSGIASLKHLLRLDLSDNNIHGPIPNELSSLTHLLTLRLQNNVLSGQVPDLSVSLVNLTELNFTNNELYGRLPDAMLKKFGDKTFSGNEGLCGSTPFPACSFTGSPPSSASPHQIVPSNPSSLPESQTSVIVNPKTQRRKGLSPGAIVAIVVANCVALLVVTSFIVAHCCARGRSSNSMVGSENGKRKSGSSGSGSEKKGHANNGGADSDGTSGTDRSRLVFFDRRNQFELEELLRASAEMLGKGSLGTVYKAVLDDGSSVAVKRLKDANPCARNEFEQYMDIIGKVKHPNIVRFRAYYYAKEEKLLVYDYLPNASLHSLLHGNRGPGRIPLDWTTRVSLVLGAARGLARIHAEYNAAKIPHGNVKSSNVLLDKNGVACISDFGLSLLLNPAHAIARLGGYRAPEQEQVKRLSQQADIYSFGVLLLEVLTGRAPSQHPSPARPRADEDEQDVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLACVASQPENRPTMAEVAKMIEEIRVEQSPLAEDYDESRNSLSPSLATTEDGLP 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1420 680 Pfam Protein kinase domain 374 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1420 680 ProSiteProfiles Protein kinase domain profile. 370 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1420 680 ProSiteProfiles Leucine-rich repeat profile. 96 118 IPR001611 GO:0005515
Alju01g1420 680 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 652 IPR046959 -
Alju01g1420 680 MobiDBLite consensus disorder prediction 309 333 - -
Alju01g1420 680 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 446 660 - -
Alju01g1420 680 FunFam pollen receptor-like kinase 1 340 445 - -
Alju01g1420 680 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Alju01g1420 680 Gene3D Transferase(Phosphotransferase) domain 1 446 670 - -
Alju01g1420 680 CDD STKc_IRAK 376 650 - -
Alju01g1420 680 SUPERFAMILY L domain-like 33 211 - -
Alju01g1420 680 MobiDBLite consensus disorder prediction 237 262 - -
Alju01g1420 680 Gene3D Phosphorylase Kinase; domain 1 345 445 - -
Alju01g1420 680 FunFam Nuclear pore complex protein NUP107 29 184 - -
Alju01g1420 680 Gene3D Ribonuclease Inhibitor 115 235 IPR032675 -
Alju01g1420 680 SUPERFAMILY Protein kinase-like (PK-like) 374 648 IPR011009 -
Alju01g1420 680 MobiDBLite consensus disorder prediction 309 347 - -
Alju01g1420 680 Gene3D Ribonuclease Inhibitor 24 114 IPR032675 -
Alju01g1420 680 MobiDBLite consensus disorder prediction 655 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1420 Alju-ChrAlju01 11274167 11276298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1420 25 676 Receptor kinase-like Gene Family AT2G36570 67.776 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Alju01g1420 Pkinase 5.3e-34 CL0016