Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1417 ATGGAAGAAAGTGTGTCGGCTTCAACCCCACAACCTCCGACGACATGTCTGCCTCAGGCAAGCAAGACAGACGACGCGGTGAATAATAGTGGTGGAACAATAGTGGTTGCAGAACCGGCCTCAACGCCGGCAAGTGGAGGCCAAGCCAGCTTTGATCTGTTGGGCAAGAAGAAGAGAGGAAGGCCAAGAAAATATGACGCAGATGGCAATTTAACGACGTCGTATCAGAACCACAAATCTGCCTCTGCCTTCTCTCTCTCCTCCAAAAAAGCTCGACCCAAGCCACTTCCCCACCTCTTCGCTTCCTTCGGTGGGTTTTTTGCCAACACAGCTGGTGGGGATTTTACGCCTCATGTGGTCACTGTTCATGCTGGAGAGGATGTCGCCGGAAAAATTATTTCATTTGCACAAAACGGTCCCAGAGGAATATGCATTCTCTCTGCCAATGGAGCTATCTCTAATGTAACAATGCGCCAACCTGGTTCTTCCGGTGGCTTGTTGACATACGAGGGTCGATTTGAGATTTTATCTCTGTCTGGGTCATTCACAATGAACGACAATGGCGGTGGCATGACAAGTCGGACCGGTGGGTTGAGTGTCTCACTGGCCGGCCCCGATGGACGGGTCATCGGAGGTGGTGTTGCTGGTATATTGACAGCGGCAAGCCCCATCCAGATTGTGATGGGAAGCTTCATGTCAAATGGTTATTTCTATAAGAAACATAAGAAGAAGCAGCACCGAGAACAACATACGGTGGCTTCTCCTAATCCAGGTGGTGGTCCAGATACAGGGATGGCAGCTAGGCCTGTCTCACGAGAAATTCCTAATGGTGAAGCCTGTTTGAAACCATCGTCCCAAATACCGGAACAAGGCCTGACAGAATCCGAGGATGTCTCTAACCAGAATTTGAACGGTTCTCAACATTTGCCAATTCAAAGTCCATACCCGGACATCAATATATCTCTGCCTGCCCAATAA 978 0.4959 MEESVSASTPQPPTTCLPQASKTDDAVNNSGGTIVVAEPASTPASGGQASFDLLGKKKRGRPRKYDADGNLTTSYQNHKSASAFSLSSKKARPKPLPHLFASFGGFFANTAGGDFTPHVVTVHAGEDVAGKIISFAQNGPRGICILSANGAISNVTMRQPGSSGGLLTYEGRFEILSLSGSFTMNDNGGGMTSRTGGLSVSLAGPDGRVIGGGVAGILTAASPIQIVMGSFMSNGYFYKKHKKKQHREQHTVASPNPGGGPDTGMAARPVSREIPNGEACLKPSSQIPEQGLTESEDVSNQNLNGSQHLPIQSPYPDINISLPAQ 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1417 325 ProSiteProfiles PPC domain profile profile. 112 258 IPR005175 -
Alju01g1417 325 MobiDBLite consensus disorder prediction 1 36 - -
Alju01g1417 325 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 231 IPR005175 -
Alju01g1417 325 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 31 286 IPR039605 GO:0003680
Alju01g1417 325 CDD DUF296 116 231 IPR005175 -
Alju01g1417 325 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 234 - -
Alju01g1417 325 MobiDBLite consensus disorder prediction 286 314 - -
Alju01g1417 325 Gene3D - 117 252 - -
Alju01g1417 325 MobiDBLite consensus disorder prediction 241 325 - -
Alju01g1417 325 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1417 Alju-ChrAlju01 11249074 11250559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1417 54 255 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 53.125 1.39e-67 214