Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1404 ATGGAAATGCCCGGTAGAAGATCCAACTACACACCGTTGAGCCAAATTCCTGACGATCCCTACGGTGGCGGAGCCGCCGTGTCGTCTGGGACAGCTGCTACCTCTTCGTTGTTTGGTTCTTCATCTGGGGATGGAAAGAACATTAAAGGCAAGTTGGACAGAGGGTTCGATTGGGACTTGAGTACTGATCATAGAGTGACTCAGCAGGGGAACCGGATCGGAAGTTTGTTTCCGTCGATCGGGTTGCAGAGGCAGTCTAGTGAGAGCAGTTTTGGCGAAAGCTCGCTATCAGGAGAGTATTATGCTCCGACTCCATCTACGGCAGCTGCGAATGAGATCGATGCATTTGGGTATATGCATGATGATGGAGTTTGGATTGGTGTTGGAGCCGACTTAAGACCCAAGTTAGCGGAAACGACGGTGCGAACAGCAGGGTCGTCTTCAGGAAAAAGTTGGGCGCAGCAGACAGAGGAGAGTTATCAATTACAGCTAGCTTTGGCCCTTCGGCTTTCATCTGATGCAACGTGCGCTGATGATCCCAATTTTCTGGATCCCGTCCCAGATGAATCTGCATTAAGGTCGTCATCCTCAAGCTCTCCGGAGGCTCAGTCACATAGATTCTGGGTTAATGGCTGCTTATCATACTCCGACAAAATTCCTGATGGCTTTTTCTTAGTTCATGGGATGGATCCCTATGTGTGGACTATGTGCACTGATCTGCAGGAAAATGGCCGAATTCCATCTGTTGAATCACTGAAGTCTGTGGATCCTTGTGCTGACTCTTCACTTGAAGTAGTTTTGGTTGATCAACGTAGTGATCCCAGCTTAAAGGAATTGCAAAATGGAGCGCATAGTATTTCTTGTAGCAGTTTAACCTCTAAAGAGGTTGTAGACCAGCTTGCCAAGCTGGTTTGCAACCGAATGGGGGGTTCAGCATCTGTTGGCGAGGATGACCTTCTTTCTATTTGGAGGGAGTGCAGTAAAGATCTTAAAGATTGCTTAGGATCTGTTGTTGTTCCAATAGGCAGTCTTTCTGTTGGCATCTGCAGACATCGTGCTACATTATTCAAAGTACTAGCTGACACCATTGATTTACCATGTCGGATTGCAAAGGGCTGTAAATATTGTTCTAGAGATGATGCTTCCTCTTGCCTAGTCCGTTTTGGACTTGATAGGGAATATCTGGTTGATTTAATTAGGAAGCCAGGTTACTTGTGGGAGCCAGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTCCTTCACCCCTGTGCTTTCCAAGACTTAAACCAGCTGAACCTACAATTGATTTCAGGTCACTTGCCAAACAGTATTTCTCTGATCGTCTATCCCTTGAGCTTGCTTTTGACAATAATTCTGCAGAACAGTTTGATCGGAAGTGCGGGGACAGGAATAACCCAAGGTCAATTTCAAAGGAAAGCAGCGGAACAAAAGATCAAGGTTCTGAAGCATTTAATTCATGTAAACCTTCCCAGGACGTTGCAGACTCTACGACTTTGGGCAAGGCTCCATTGCCTGTAAATCACAACCTACCTGTGGGCCATAGAGATATTATGAAGCCTTTAGTGCTTACAAATCCAAATGTGGATGCTATCGAGGGTAGGTGGTTTATTGATGGAAGCCAACTGGTTCCTACTAAACCAAACATAGAATTAGGCCTTGATATGGAGGATTTGGACATTCCATGGAGTGATCTTGTTTTAAAAGAGCGAATAGGATCAGGTTCTTTTGGAACTGTACATCGTGCCGAGTGGAATGGCTCGGAAGTTGCTGTTAAAATTCTGATGGAACAAGATTTCCATGCTGAACGTTTCAAGGAATTTCTGAGGGAGGTTGCAATAATGAAGAGGTTGAGGCATCCAAACATTGTTTTATTTATGGGGGCAGTCACCCAGCCTCCAAACTTATCAATTGTCACAGAATATTTATCAAGGGGTAGCTTGTACAGACTGTTGCATAAACCTGGTGCCAAAGAGATGCTGGGTGAAAGGGCTAGACTCAGTATGGCTTATGATGTGGCAAAGGGAATGAATTATCTTCACAAACGTAACCCGCCCATTGTTCATAGAGATTTGAAGTCCCCAAATCTTCTTGTAGACAAGAAATATACTGTCAAGGTCTGCGATTTTGGGCTTTCCCGTCTAAAGGCAAATACATTTCTCTCGTCAAAGTCAGCTGCTGGGACTCCCGAGTGGATGGCTCCAGAAGTTCTATGTGATGAGCCATCAAATGAGAAGTCAGATGTTTATAGCTTTGGTGTAATCTTGTGGGAGCTTACAACATTGCAACAGCCCTGGAGTAATTTGAATCCGGCACAGGTTGTGGCAGCTGTTGGTTTCAAGGGCAAAAGGCCTGAGATCCCACGAGATTTGAATCCTCAAGTAGCTGCAATAATTGAGGCTTGCTGGGCCAATGAGCCCTGGAAACGTCCTTCGTTTGAAAGTGTCATGGATTCTTTGAGACCATTGATCAAACCCCCTACACCTCAAACTGGTCGTCCACCATTACTTTCCTGA 2538 0.4539 MEMPGRRSNYTPLSQIPDDPYGGGAAVSSGTAATSSLFGSSSGDGKNIKGKLDRGFDWDLSTDHRVTQQGNRIGSLFPSIGLQRQSSESSFGESSLSGEYYAPTPSTAAANEIDAFGYMHDDGVWIGVGADLRPKLAETTVRTAGSSSGKSWAQQTEESYQLQLALALRLSSDATCADDPNFLDPVPDESALRSSSSSSPEAQSHRFWVNGCLSYSDKIPDGFFLVHGMDPYVWTMCTDLQENGRIPSVESLKSVDPCADSSLEVVLVDQRSDPSLKELQNGAHSISCSSLTSKEVVDQLAKLVCNRMGGSASVGEDDLLSIWRECSKDLKDCLGSVVVPIGSLSVGICRHRATLFKVLADTIDLPCRIAKGCKYCSRDDASSCLVRFGLDREYLVDLIRKPGYLWEPDSLLNGPSSISFPSPLCFPRLKPAEPTIDFRSLAKQYFSDRLSLELAFDNNSAEQFDRKCGDRNNPRSISKESSGTKDQGSEAFNSCKPSQDVADSTTLGKAPLPVNHNLPVGHRDIMKPLVLTNPNVDAIEGRWFIDGSQLVPTKPNIELGLDMEDLDIPWSDLVLKERIGSGSFGTVHRAEWNGSEVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKPGAKEMLGERARLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLCDEPSNEKSDVYSFGVILWELTTLQQPWSNLNPAQVVAAVGFKGKRPEIPRDLNPQVAAIIEACWANEPWKRPSFESVMDSLRPLIKPPTPQTGRPPLLS 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1404 845 MobiDBLite consensus disorder prediction 179 202 - -
Alju01g1404 845 Gene3D Transferase(Phosphotransferase) domain 1 652 837 - -
Alju01g1404 845 FunFam Serine/threonine-protein kinase CTR1 652 837 - -
Alju01g1404 845 ProSitePatterns Protein kinases ATP-binding region signature. 579 600 IPR017441 GO:0005524
Alju01g1404 845 ProSiteProfiles Protein kinase domain profile. 573 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1404 845 MobiDBLite consensus disorder prediction 464 513 - -
Alju01g1404 845 SMART serkin_6 573 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1404 845 MobiDBLite consensus disorder prediction 1 29 - -
Alju01g1404 845 Pfam Protein tyrosine and serine/threonine kinase 574 827 IPR001245 GO:0004672|GO:0006468
Alju01g1404 845 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 189 830 - -
Alju01g1404 845 MobiDBLite consensus disorder prediction 475 505 - -
Alju01g1404 845 Pfam Ethylene-responsive protein kinase Le-CTR1 201 405 - -
Alju01g1404 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Alju01g1404 845 Gene3D Phosphorylase Kinase; domain 1 566 651 - -
Alju01g1404 845 PRINTS Tyrosine kinase catalytic domain signature 754 776 IPR001245 GO:0004672|GO:0006468
Alju01g1404 845 PRINTS Tyrosine kinase catalytic domain signature 647 660 IPR001245 GO:0004672|GO:0006468
Alju01g1404 845 PRINTS Tyrosine kinase catalytic domain signature 798 820 IPR001245 GO:0004672|GO:0006468
Alju01g1404 845 PRINTS Tyrosine kinase catalytic domain signature 735 745 IPR001245 GO:0004672|GO:0006468
Alju01g1404 845 PRINTS Tyrosine kinase catalytic domain signature 688 706 IPR001245 GO:0004672|GO:0006468
Alju01g1404 845 CDD STKc_MAP3K-like 579 827 - -
Alju01g1404 845 FunFam Serine/threonine-protein kinase isoform 1 563 651 - -
Alju01g1404 845 SUPERFAMILY Protein kinase-like (PK-like) 557 826 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1404 Alju-ChrAlju01 11103106 11111026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1404 1 843 MAP Kinase Kinase Kinase AT5G03730 66.705 0.0 1003
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Alju01g1404 PK_Tyr_Ser-Thr 5.5e-70 CL0016