Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1393 ATGGAAATGGAAGATCACCACAACAATCACCAACATCATCCCCAGCAATATGCCATCGCCGATCTCAGGCACCTCATGAACGGAGCTTCCAGGTCTACTGCCACTCATTTCCCCTCCATACCTCCCCATCAACCCACGGCGGAGCTCTTCCACCCTCACCGGAATCTCACTCCCAACCACCATCACCACTACGACATGATGATGTTTGGTCGTCATGTCACCGATGTAATGCCTCATCGTGCCCTCCACGACTTTCCCTCCGATTCGCCCCCCGCCGCCGCCGCTCCTCCACCAACTGTAGCCACTCCGGCCACCACCGTCAGCGCTTTCACTCCTCCGCTCAGTGGCTTGGAGGCTGACACCCCAGGCTGCCTCGCTGGGGATGCCTCCACCGGAAGATGGCCCAGACAGGAAACACTCACTCTCCTTGAGATCAGATCTCGCCTCGACCCTAAATTCAAAGAGGCCAATCAGAAAGGTCCCTTATGGGACGAAGTCTCTAGGATCATGGCGGAAGAATATGGATATCAAAGGAGTGGGAAAAAATGCAGGGAAAAATTCGAGAACTTGTACAAATATTACAAGAAGACAAAGGAAGGTAAGGCGAGGAGACAGGATGGGAAGCATTACAGATTCTTCCGTCAACTTGAAGCCTTGTATGGAGGAAACAGCAACTCAAACTCAGTACCAGAAACCAATTATGTTAGCGGAGGAATTGGGTTTCAGACACCCTCCCAAACAAATCATCAAGACATGTGTCAGTCTCACAACAACCACAATAAGACTTGTGATAGCCTCAGCCTTACAAACTCAACGGATTTCGGCACGTCATCATCGGAGGACAACAACAACCTTTGCAGCATGGAAAATGATTCAACGGAGAAGGGGATGAGGAAGAGGAGTACTAGCGGCAGCGGAAGCAGGTGGAAGGCGAAAATAAAGGAGTTCATTGACTCACAGATGAAGAAGCTGATTGAGAAGCAAGAGGCGTGGATGGATAGGCTGGTGAAGACGCTCGAACAGAAGGAGAAGGAGAGAGTCTTAAGAGAGGAAGAATGGAGAAGACAAGAGGCCGCCAGGTTGGAAATGGAGCACAAGTTTCGTGCTAAAGAGAGAGCCTGGATTGAAGCAAGAGACGCTGCTTTAATGGACGCCTTGCAGAAACTAACAGGAAGAGAGGTAATGAAAGCTCAATCTCCTGTTGAGCAGGCTCTAATTATGGCTAATGACATTCATAGGGAAAACCAGAACGAAGAGGGAAGTGAAATCCTCAATGCCAAGGAAGGAGTTAAGAAGCGCAAGGAAGAGTCTAGAAGCTGTTTTTACTTTGACAGCAACATCAATGACCAGCCATCCTTGTATACCCAAGGAACGACACCGTACTGTGATATCAACGTTAATGATCATCAACGGCACGACAATGAGAGGCTACAAACAAATGATGGTTCTTCGCCTTCAAATTCCAATGCGGTTGGCGCTGACGTTAACTGCTTTCCCTTCTTTATTACTGAAGGATCAGAAAATTTGTGGGAAAACTACGGCTTGAAGATTAATAAAGGAAACCAAAACCAGTGA 1575 0.4844 MEMEDHHNNHQHHPQQYAIADLRHLMNGASRSTATHFPSIPPHQPTAELFHPHRNLTPNHHHHYDMMMFGRHVTDVMPHRALHDFPSDSPPAAAAPPPTVATPATTVSAFTPPLSGLEADTPGCLAGDASTGRWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEVSRIMAEEYGYQRSGKKCREKFENLYKYYKKTKEGKARRQDGKHYRFFRQLEALYGGNSNSNSVPETNYVSGGIGFQTPSQTNHQDMCQSHNNHNKTCDSLSLTNSTDFGTSSSEDNNNLCSMENDSTEKGMRKRSTSGSGSRWKAKIKEFIDSQMKKLIEKQEAWMDRLVKTLEQKEKERVLREEEWRRQEAARLEMEHKFRAKERAWIEARDAALMDALQKLTGREVMKAQSPVEQALIMANDIHRENQNEEGSEILNAKEGVKKRKEESRSCFYFDSNINDQPSLYTQGTTPYCDINVNDHQRHDNERLQTNDGSSPSNSNAVGADVNCFPFFITEGSENLWENYGLKINKGNQNQ 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1393 524 FunFam trihelix transcription factor PTL-like 134 196 - -
Alju01g1393 524 MobiDBLite consensus disorder prediction 81 113 - -
Alju01g1393 524 MobiDBLite consensus disorder prediction 273 291 - -
Alju01g1393 524 MobiDBLite consensus disorder prediction 273 306 - -
Alju01g1393 524 Coils Coil 325 352 - -
Alju01g1393 524 PANTHER FI21293P1 119 467 - -
Alju01g1393 524 MobiDBLite consensus disorder prediction 31 56 - -
Alju01g1393 524 ProSiteProfiles Myb-like domain profile. 126 191 IPR001005 -
Alju01g1393 524 Pfam Myb/SANT-like DNA-binding domain 133 219 IPR044822 -
Alju01g1393 524 Gene3D - 134 196 - -
Alju01g1393 524 CDD GT1 133 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1393 Alju-ChrAlju01 11022481 11025003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1393 431 519 Trihelix Transcription Factor Family AT5G03680 39.806 7.58e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju01g1393 Myb_DNA-bind_4 5.3e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1393 01 11022481 11025003 Alju01g1393 01 11022481 11025003 ECH