Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1392 ATGTTATCGATCATCATTCAGAATTTGACGAGAAAAGGGTTTTTCTTAAACTGCTCTCTTAATAGTGATGACGAGAACACGGCCTCCAACCCAGATATCCAACACAAAGCTGGCTTACACCCCAGTGCTTCACACGCCGCAGTTCATAAACAACTGGTTTGCACTTTCATCTCCGATCTTTGTACCTTTTCACTCAGATTCCAAGCCCCCATAAATGATGGCTTCCCTCAACTTCCAACCGCCACGGAATCTCACCAATCTCAACCTCAAAAAACTGCAAAAACGATGCGTCCCAATAATACTCACTCTAGTTCTGCCAGCTCTCCCACCGGAGCTAGCAGCAGCAGCGGTGCAGCCACCGGGCGTCACCCGGTGTACCGGGGGGTGAGGCGTCGGAGCAGCGGGAAATGGGTGTCTGAAATTCGTGAGCCCAGGAAGCCCAATAGGATATGGTTAGGTACATTCCCTACCCCTGAAATGGCTGCCATTGCCTATGACGTGGCTGCCCTGGCTCTCAAGGGCAGCGACGCTGACCTTAACTTCCCTGACTCCGCTTCTTCGCTGCCCGTCCCGGCCTCTCGCTCTGCCCGTGATATTCAGATTGCTGCGGCCAGCGCCGCCGCCGCAGCCGGGGCAGCTAGGGATGCCTTGTCCGGGCCTAATGAACAAGGCAATGCTAATGTTAGTGTATCCGAGGGACAACAATATGGTGGGGCTGAGTTTGTGGACGAGGATTTGATCTTTGATTTACCTAATGTTCTTGTCAATATGGCTGAAGGAATGCTGCTCACTCCTCCCCCTCTGGATTTTACTGGCAACAACGATGCTGATGGTTCTGCCGGAGGAAACGTCGGTGGTGATGACCAAAACCTTTGGAAATTTCCATAA 888 0.5203 MLSIIIQNLTRKGFFLNCSLNSDDENTASNPDIQHKAGLHPSASHAAVHKQLVCTFISDLCTFSLRFQAPINDGFPQLPTATESHQSQPQKTAKTMRPNNTHSSSASSPTGASSSSGAATGRHPVYRGVRRRSSGKWVSEIREPRKPNRIWLGTFPTPEMAAIAYDVAALALKGSDADLNFPDSASSLPVPASRSARDIQIAAASAAAAAGAARDALSGPNEQGNANVSVSEGQQYGGAEFVDEDLIFDLPNVLVNMAEGMLLTPPPLDFTGNNDADGSAGGNVGGDDQNLWKFP 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1392 295 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 86 293 IPR045277 GO:0003700
Alju01g1392 295 FunFam Ethylene-responsive transcription factor 2 124 183 - -
Alju01g1392 295 Pfam AP2 domain 124 174 IPR001471 GO:0003700|GO:0006355
Alju01g1392 295 Gene3D AP2/ERF domain 125 183 IPR036955 GO:0003700|GO:0006355
Alju01g1392 295 CDD AP2 126 184 IPR001471 GO:0003700|GO:0006355
Alju01g1392 295 MobiDBLite consensus disorder prediction 76 120 - -
Alju01g1392 295 SUPERFAMILY DNA-binding domain 125 184 IPR016177 GO:0003677
Alju01g1392 295 ProSiteProfiles AP2/ERF domain profile. 125 182 IPR001471 GO:0003700|GO:0006355
Alju01g1392 295 MobiDBLite consensus disorder prediction 76 140 - -
Alju01g1392 295 SMART rav1_2 125 188 IPR001471 GO:0003700|GO:0006355
Alju01g1392 295 MobiDBLite consensus disorder prediction 269 295 - -
Alju01g1392 295 PRINTS Ethylene responsive element binding protein signature 164 184 IPR001471 GO:0003700|GO:0006355
Alju01g1392 295 PRINTS Ethylene responsive element binding protein signature 126 137 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1392 Alju-ChrAlju01 11005196 11006495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1392 111 295 AP2-EREBP Transcription Factor Family AT2G36450 62.632 1.52e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju01g1392 AP2 1e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1392 01 11005196 11006495 Alju03g2517 03 51621203 51621958 CCT
Alju01g1392 01 11005196 11006495 Alju01g1392 01 11005196 11006495 ECH