Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1391 ATGAGGAACAAGAAGCGAAGGTCAGGAAGGAAGAAGTTCCAAGAGACACGTCATCCAACATACAAAGGCGTGAGGCAAAGAAACGGCAAGTGGGTGTGCGAGCTTCGTCAACCTAACAAAAGCAAATCACGCTTGTGGCTCGGCACTTTCCTCACCCCTCACATGGCTGCCATGGCTCACGATATTGCTGCTCTCGCTTTCAGGGGCGATTCTGCCTCCTTGAATTTCCCCGACGCCGCTTCCTCCTTGCCTCGCCTTAGTGCTCGCACCTCCTCCCTCAGAGCCATCCAGTTCGCCGCCATGGAAGCCGCCCAGAAGCTTCTCTGCGGCCACCCCACTGGGAACAACATGTCAGCTTTAACTGTGGACGGTGACTTTGAGTTATTGGAAGCATTAGAGGAAGAAGGAGACGCAGAGGCGAGGAGTATGTATTGGGACGAAGAAGAGGTGTTTAACATGCCTGGATTCATGAACAGCATGGCAGAAGGGTTGATCATCACGCCACCAGCCTTGACGACGGGCTTCAATTGGGACGACATCGAAATCGAAACTACCACCGACTTCAATCTCTGGGCAGACTGA 582 0.5326 MRNKKRRSGRKKFQETRHPTYKGVRQRNGKWVCELRQPNKSKSRLWLGTFLTPHMAAMAHDIAALAFRGDSASLNFPDAASSLPRLSARTSSLRAIQFAAMEAAQKLLCGHPTGNNMSALTVDGDFELLEALEEEGDAEARSMYWDEEEVFNMPGFMNSMAEGLIITPPALTTGFNWDDIEIETTTDFNLWAD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1391 193 MobiDBLite consensus disorder prediction 1 21 - -
Alju01g1391 193 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Alju01g1391 193 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Alju01g1391 193 PRINTS Ethylene responsive element binding protein signature 59 79 IPR001471 GO:0003700|GO:0006355
Alju01g1391 193 SUPERFAMILY DNA-binding domain 20 78 IPR016177 GO:0003677
Alju01g1391 193 ProSiteProfiles AP2/ERF domain profile. 20 77 IPR001471 GO:0003700|GO:0006355
Alju01g1391 193 CDD AP2 21 79 IPR001471 GO:0003700|GO:0006355
Alju01g1391 193 SMART rav1_2 20 83 IPR001471 GO:0003700|GO:0006355
Alju01g1391 193 Gene3D AP2/ERF domain 20 78 IPR036955 GO:0003700|GO:0006355
Alju01g1391 193 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 3 191 IPR045277 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1391 Alju-ChrAlju01 10978546 10979127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1391 5 192 AP2-EREBP Transcription Factor Family AT4G25470 47.179 2.70e-46 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju01g1391 AP2 1.1e-09 CL0081