Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1384 ATGATTCACACTTTCGTCCGAGTCCAAGAGAAAACAAACCCTAGCAGTATATATCAAATTGCCCGGCCTTTCTTTTTCATTCCTTGTCTGCATCGGAATTCGCCGCTCGTTCTCCTTCAATCACTCCGAACCGGATCTCCATATCCCCGGAATATGAAGGTGATTGCTGCGTATTTGCTCGCCGTGTTGGGTGGCAACACTAGCCCTTCCGCCGATGATATCAAACATATCCTCGGATCTGTTGGAGCAGAAGCGGATGGTGATAGAATTGAACTTCTTTTGTCTGAATTGAAGGGCAGAGATATAACGGAGGTTATTGCTAGTGGTAGGGAAAAGTTGGCCTCAGTGCCCTGTGGCGGTGGGGCTGCAGTTGCAGTGGCTGCTGCACCTGGCGCTGGTGGTGCCGCGGCTGCTCCAGCTGCGGCTGAGTCAAAGAAAGAGGAAAAGGTGGCGGAGAAAGAGGAATCTGACGAGGATATGGGCTTCAGCCTCTTCGATTAA 501 0.509 MIHTFVRVQEKTNPSSIYQIARPFFFIPCLHRNSPLVLLQSLRTGSPYPRNMKVIAAYLLAVLGGNTSPSADDIKHILGSVGAEADGDRIELLLSELKGRDITEVIASGREKLASVPCGGGAAVAVAAAPGAGGAAAAPAAAESKKEEKVAEKEESDEDMGFSLFD 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1384 166 CDD Ribosomal_P2 52 166 IPR044076 GO:0002182|GO:0003735|GO:0022625
Alju01g1384 166 Pfam 60s Acidic ribosomal protein 68 165 - -
Alju01g1384 166 Gene3D - 51 110 IPR038716 -
Alju01g1384 166 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 52 166 IPR044076 GO:0002182|GO:0003735|GO:0022625
Alju01g1384 166 Hamap 50S ribosomal protein L12 [rpl12]. 53 166 IPR027534 GO:0003735|GO:0005840|GO:0006414
Alju01g1384 166 MobiDBLite consensus disorder prediction 137 166 - -
Alju01g1384 166 FunFam 60S acidic ribosomal protein P2 50 110 - -
Alju01g1384 166 MobiDBLite consensus disorder prediction 142 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1384 Alju-ChrAlju01 10916087 10918087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1384 52 166 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 63.478 2.53e-33 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1384 01 10916087 10918087 Alju01g1384 01 10916087 10918087 ECH