Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1359 ATGGTGGTGGCAGAAGGGGAAGTGGACTCGTCAATACAGTCAGAACAAACACCAAAAAACCAAACAATGTCATCTCTGGGAAGGCAATCGTCAATATATGCTCTCACCCTTGACGAGTTCCAACACAGGCTATGCGAAGAAGGCAAGAATTTCGGGTCCATGAACATGGACGAGTTTCTCAGTAGCATCTGGAACGTCGAAGATAACCAAACCATCATCGTCAACAACAACAACTCTGATGATAAAGGCACAAGAAAGCAGGCAAGCCTGTCTCGCCAGGGATCTCTCACCATTCCCACTCCACTCTTCAGAAAAACAGTGGACCAAGTTTGGTATGAGATACACAACCAGAGTACCAATACCAACAACAACAACGATGGCGATGCTGGCAACAATATACGGAATTCCAAGTCTACCCCTCGCCAGCCCACTTACGGGGAGATGACTCTGGAGGATTTCTTGATCAAAGCAGGGGTAATTCGGGAACCGTATCCTGTGCCTGCTCAGTACGGGCTGTACCCAAATCACAAACCGGCATTGGGGCCCACTTTCCGCGGATACGCCGGAGATGGCAAGAGAGATGCTTCTGGCTATCCTCCTCCGGGGGTTTGCTACGGAGGAGGTGGGTATGGGGCGGCGGCGCCGGTGAGCCCTGTATCATCGGATGGGATGGCGGCGAGGGAGAACGCCAGCGGCGGACAGTACGGGATGGAGATGGGAGTGTTGAGAGGAAGAAAGAGAATAATCGATGGGCCGGTGGAGAAGTTAGTGGAGAGAAGACATAGAAGGATGATTAAGAACAGAGAGTCGGCGGCGAGGTCCAGAGCCAGAAAACAGGCATACACCGTTGAATTGGAAGCAGAACTTAGCCAATTAAGAAAAGAGAATGCCCAGCTGAAACTTGCTCTGGTGGAGCTTGAGAGGAGAAGGAAGCGACAGTGTTTGGAGGAATTGAAGAACAGTGACTCCAGGGTTAAGACCAAAGCTCAAAAGGCGGGAGACAAATTGAGAGTTCTGAGAAGGAACCAAAGTGGGCATTTGTGA 1044 0.5067 MVVAEGEVDSSIQSEQTPKNQTMSSLGRQSSIYALTLDEFQHRLCEEGKNFGSMNMDEFLSSIWNVEDNQTIIVNNNNSDDKGTRKQASLSRQGSLTIPTPLFRKTVDQVWYEIHNQSTNTNNNNDGDAGNNIRNSKSTPRQPTYGEMTLEDFLIKAGVIREPYPVPAQYGLYPNHKPALGPTFRGYAGDGKRDASGYPPPGVCYGGGGYGAAAPVSPVSSDGMAARENASGGQYGMEMGVLRGRKRIIDGPVEKLVERRHRRMIKNRESAARSRARKQAYTVELEAELSQLRKENAQLKLALVELERRRKRQCLEELKNSDSRVKTKAQKAGDKLRVLRRNQSGHL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1359 347 Gene3D - 257 308 - -
Alju01g1359 347 FunFam BZIP transcription factor 257 308 - -
Alju01g1359 347 MobiDBLite consensus disorder prediction 117 145 - -
Alju01g1359 347 MobiDBLite consensus disorder prediction 9 25 - -
Alju01g1359 347 Pfam bZIP transcription factor 259 308 IPR004827 GO:0003700|GO:0006355
Alju01g1359 347 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 27 311 IPR043452 GO:0003700|GO:0045893
Alju01g1359 347 Coils Coil 282 316 - -
Alju01g1359 347 MobiDBLite consensus disorder prediction 319 347 - -
Alju01g1359 347 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 257 309 IPR004827 GO:0003700|GO:0006355
Alju01g1359 347 SUPERFAMILY Leucine zipper domain 259 304 IPR046347 GO:0003700|GO:0006355
Alju01g1359 347 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 262 277 IPR004827 GO:0003700|GO:0006355
Alju01g1359 347 SMART brlzneu 255 317 IPR004827 GO:0003700|GO:0006355
Alju01g1359 347 MobiDBLite consensus disorder prediction 319 341 - -
Alju01g1359 347 MobiDBLite consensus disorder prediction 1 25 - -
Alju01g1359 347 CDD bZIP_plant_BZIP46 259 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1359 Alju-ChrAlju01 10667619 10669060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1359 2 314 bZIP Transcription Factor Family AT2G36270 47.291 1.80e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju01g1359 bZIP_1 1.4e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1359 01 10667619 10669060 Alju03g2486 03 51396090 51402165 CCT
Alju01g1359 01 10667619 10669060 Alju01g1359 01 10667619 10669060 ECH