Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1328 ATGGCGAATATGGCACCAGGATATCGGTTCTATCCAACTGAAGAGGAACTCATTTCCTTCTATTTGCAGAGAAAGCTTGAGGGAGATCAGAGCGAGGACATCAACCGGGTTATACCTGTGCTTGATATTTATGAATACAATCCATGGGATCTCCCACAGGTGTCGGGAGAGGCGAGCCTGAGAGACACGGAGCAGTGGTTCTTTTTCATTCCGAGGCAAGAAAGCGAAGCTCGCGGAGGAAGACCAAGACGGCTCACAACAACCGGCTACTGGAAGGCCACCGGATCTCCTAACCACGTTTATTCCTCTGATAATCGCATCATCGGCATGAAAAGAACCATGGTTTTCTACAGCGGAAGAGCCCCCAACGGCCGCAAAACCGACTGGAAGATGAACGAATACAAGGCCATCGGCTGCGAACCATCCTCCACTCGCACACCCGATCCCCGGATAAGGGTGGAATACAGTGTGTGCAGGGTGTACAAGAAATCAAAGTGCCTGAGAGCGTTTGATAGGAGGCCACCTCCAAGGAGGGAGATGATAATGGATGCATCTGGGGGTTCAAGCTCAACGTCTCAGCAGCAACAACAAGTGCAAATCCCAGATGCATCGGGATCTTCGTCAATGGGAGCGATAGGTATAGCAAGCTCTCCCGATGAGAGTTCATCATTATCAGGGGGAGACCATCATGGTGATTGTGGTGGTGGTGGGCAGGCTTCACAGAGTGGGGAAGCGGTGGGTCAAATGGAGTTGGACGATGAGCCCTTGTTGGATTGGGAGCAAGTTGACTGGTTTCTTGCCAAGCATGACTCCACCATGTGA 822 0.5146 MANMAPGYRFYPTEEELISFYLQRKLEGDQSEDINRVIPVLDIYEYNPWDLPQVSGEASLRDTEQWFFFIPRQESEARGGRPRRLTTTGYWKATGSPNHVYSSDNRIIGMKRTMVFYSGRAPNGRKTDWKMNEYKAIGCEPSSTRTPDPRIRVEYSVCRVYKKSKCLRAFDRRPPPRREMIMDASGGSSSTSQQQQQVQIPDASGSSSMGAIGIASSPDESSSLSGGDHHGDCGGGGQASQSGEAVGQMELDDEPLLDWEQVDWFLAKHDSTM 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1328 273 Gene3D NAC domain 13 167 IPR036093 GO:0003677|GO:0006355
Alju01g1328 273 SUPERFAMILY NAC domain 2 163 IPR036093 GO:0003677|GO:0006355
Alju01g1328 273 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
Alju01g1328 273 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 199 - -
Alju01g1328 273 Pfam No apical meristem (NAM) protein 6 135 IPR003441 GO:0003677|GO:0006355
Alju01g1328 273 MobiDBLite consensus disorder prediction 172 253 - -
Alju01g1328 273 MobiDBLite consensus disorder prediction 184 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1328 Alju-ChrAlju01 10498077 10499863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1328 7 264 NAC Transcription Factor Family AT5G22380 46.512 3.27e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju01g1328 NAM 1.3e-31 No_clan