Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1320 ATGTCAACGAAGCCCGAGTACGAATGTATCTCTTCGACAATTTGCGGCTCTTTCCCAAGTCCTTCTTTCCCCTTACCAGTTTTCTGTCTCCACCCCCTATATACTCGCACTGCTGTTTCGCCGCGGTTTCCAATGGCAGCGATCACAAGATTCATTGGCACCCGTTCTGCTTTGCGTCACTTCTCACTTGTTTCCCCTGCTCTCAGTAGAGGAATTGCCTACAAACTCTTCGTTGGAGGACTGTCATTTCTCACAACGGAGAAGGGATTGTCAGAAGCATTTTCTGATTACGGTCAAGTTGTTGAAGCAAAAATTGTGATGGACAAGGTATCAGATAGATCAAAAGGGTTTGGGTTTGTCACCTTTGCCTCAGAGGATGAGGCTGAGAATGCCATAACAGGGATGAATGGGAAGGGACTAAACGGTCGTGTTATCTTTGTGGATTATGCAAAACCCAAATCCAATATCGGTGATGAAATGCCAATTGCCAGAGGACCTCCTGAACCAACAGCAGACTGTTAA 522 0.4617 MSTKPEYECISSTICGSFPSPSFPLPVFCLHPLYTRTAVSPRFPMAAITRFIGTRSALRHFSLVSPALSRGIAYKLFVGGLSFLTTEKGLSEAFSDYGQVVEAKIVMDKVSDRSKGFGFVTFASEDEAENAITGMNGKGLNGRVIFVDYAKPKSNIGDEMPIARGPPEPTADC 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1320 173 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 70 157 - -
Alju01g1320 173 SMART rrm1_1 75 148 IPR000504 GO:0003723
Alju01g1320 173 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 76 145 IPR000504 GO:0003723
Alju01g1320 173 Gene3D - 65 158 IPR012677 -
Alju01g1320 173 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 74 152 IPR000504 GO:0003723
Alju01g1320 173 SUPERFAMILY RNA-binding domain, RBD 74 163 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1320 Alju-ChrAlju01 10415855 10418029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1320 75 172 Eukaryotic Initiation Factors Gene Family AT2G23350 30.612 8.01e-08 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1320 01 10415855 10418029 Alju01g1320 01 10415855 10418029 ECH