Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1313 ATGGGGCGCGTCCGAACCAAAACCGTGAAGAAGTCATCTCGCCAAGTGATAGAGAAGTATTACTCTCGAATGACCTTGGATTTTCACACCAACAAGAAAATCCTGGAGGAGGTAGCTCTCATTCCCTCCAAGAGGCTCCGCAATAAGATTGCCGGATTCTCCACCCACCTGATGAAGAGGATTCAGAAGGGTCCCGTTCGGGGCATTTCCCTCAAGCTTCAAGAGGAGGAGCGTGAGCGCAGAATGGATTTCGTGCCCGATGTTTCTGCAATTAAGACGGATCAGATTGAGGTCGATAAGGAGACTCTTGATATGCTCAACGCTCTTGGCATGAACGAGATTCCAGGGCTTGTCCAAGTTGATCCTGTTCCCGTTCAGCAATCCTTTGGATTTGGCCGCGGTGGTTTTGGTGGAGCCGGCAGGAGGTTCTAA 432 0.5069 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDKETLDMLNALGMNEIPGLVQVDPVPVQQSFGFGRGGFGGAGRRF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1313 143 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Alju01g1313 143 PANTHER 40S RIBOSOMAL PROTEIN S17 1 127 IPR001210 GO:0003735|GO:0005840|GO:0006412
Alju01g1313 143 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Alju01g1313 143 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Alju01g1313 143 FunFam 40S ribosomal protein S17 1 62 - -
Alju01g1313 143 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Alju01g1313 143 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1313 Alju-ChrAlju01 10327701 10328132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1313 1 143 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 79.861 1.30e-77 224