Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju01g1308 | ATGGTGAAGAACAAAATGAAGTTACCGTTTCTTGACAAGAAGTCGTCAGAAATGAGGTCTTCTTCTTCTTCTTCTTCGTGGCCGTGGCCGTCTTGTCACCAACCCAGAACCCTCTCTTTCAGAGCCAACTCCGCCGACATGTTCAACTCGGACCTCACATCAGCTGAAGCCGACCCAGTAGAGACCGTGGTTCGCGGGTTGCGGTCGGACCGGAGGAGGCTGTTCTTCGAGCCGGACGAGACAAGCTCAATACTAGAGACGAAAGCTATCTCTGCAGGAGGACGCGTACCTTTCAAAGACAGCTTCGTGTTATCCATGGAATCTCGAGACCCTTACTTAGACTTCCGGAAGTCGATGGAGGAGATGGTGGAGGCTCATGCCCTGAGGCACTTGGAGGCTCTTCAGGAGCTTCTCTGTTGGTATTTGAGGCTCAATGCTCAAAGCAATCACGTCTCTATTCTCGCTGCTTTTGTTGATTTATTGCTTGACCTTGCTCCTCCTCATTCTTCTCCTTGCGCTTCTTCTCCTTCTCCTTTATCCTTTTCTACTCCTTCCTCTCTGTCTTCTTCCTTTAGTACACACTGTGTTAATTATTCTTCTTTAGAAGCCGAGGAAGTAGAGGGTGATGCACCTGATGACAACGATGATCCCGCTTCAACATCGCAAGTTCATGACGAGGAGGAGGAGGCTTCTTGTTTGAATGCTTGA | 708 | 0.4915 | MVKNKMKLPFLDKKSSEMRSSSSSSSWPWPSCHQPRTLSFRANSADMFNSDLTSAEADPVETVVRGLRSDRRRLFFEPDETSSILETKAISAGGRVPFKDSFVLSMESRDPYLDFRKSMEEMVEAHALRHLEALQELLCWYLRLNAQSNHVSILAAFVDLLLDLAPPHSSPCASSPSPLSFSTPSSLSSSFSTHCVNYSSLEAEEVEGDAPDDNDDPASTSQVHDEEEEASCLNA | 235 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju01g1308 | 235 | ProSiteProfiles | OVATE domain profile. | 104 | 163 | IPR006458 | - | |
| Alju01g1308 | 235 | MobiDBLite | consensus disorder prediction | 202 | 235 | - | - | |
| Alju01g1308 | 235 | Pfam | Transcriptional repressor, ovate | 108 | 164 | IPR006458 | - | |
| Alju01g1308 | 235 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 26 | 164 | IPR038933 | GO:0045892 | |
| Alju01g1308 | 235 | MobiDBLite | consensus disorder prediction | 218 | 235 | - | - | |
| Alju01g1308 | 235 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 104 | 165 | IPR006458 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju01g1308 | Alju-ChrAlju01 | 10290456 | 10291163 | Dispersed/Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | OFP | Alju01g1308 | Ovate | 2.2e-21 | No_clan |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Alju01g1308 | 01 | 10290456 | 10291163 | Alju03g2435 | 03 | 50986528 | 50987196 | CCT | |
| Alju01g1308 | 01 | 10290456 | 10291163 | Alju01g3685 | 01 | 66339805 | 66340530 | ECH | |
| Alju01g1308 | 01 | 10290456 | 10291163 | Alju01g1308 | 01 | 10290456 | 10291163 | ECH |