Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1288 ATGAACCGCGCAGCTCCCGCCATGGTCGAGCGTCTCCTGAAGCTTGTTGCAGCACTCATTCTTTCGCTTGCTGTAGTGGGTTTTAGTGCCACTGATCCGAATGACGTTAAGATTCTGAACCAATTCAGGAAAGGCTTGGACAACCCGGAGCTTCTGCCGTGGCCTGAAGATGGTGGAGACCCATGTGGGAGCCCTACTTGGAAGTACATCTTCTGCAAGGGAGATAGAGTTTCCCAGATTCAGGCTAAGAACTTGAATTTGAGTGGTCCTCTGCCTCAGAATTTCAACCAGCTCTCCATGCTAGAAAACATTGGCCTTCAGAACAACAAACTCAACGGGCCATTACCGTCTTTCAGTGGGTTATCCAATTTGAGATATGCATACTTGGACTACAATGACTTCGATTCCATTCCTGCTGATTTCTTTGATGGGCTAGTGAGCCTGGAAGCCCTGGCATTGGATTATAATAATTTTAATGCCAGTACTGGGTGGCAATTCCCTCCTCATTTGCAAGATTCATCACAGTTAACCAATCTTTCCTGTATGAGCTGCAACTTAGCCGGTCCATTGCCGAGTTTTCTGGGGAATTTATCTTCTCTGTCTGTTCTGAAGCTTTCAAACAACAATTTAACTGGTGAAATTCCGGCAACTTTAAGTGGTTCGATTTTGCAGGTTCTGTGGTTGAACGATCAGCAGAACGGTGGCATCACTGGTTCTATTGATGTGGTGGCAACCATGACTTCGCTTACGAGTCTGTGGCTTCATGGAAATCACTTCACGGGGACCATTCCTAAGAACATTGGGGATTTAACTTCTCTCAAGGATTTCAATCTCAATTCTAACCAGCTCGTTGGCGAAATCCCAGATGCTTTGGGTAAAATGAAACTCGACAGTCTTGATTTGAACAACAACCACCTAATGGGACCGATCCCAACTTTCGCAGCAGGCAAAGTTTCAGACGATAATAATTATTTTTGTCAACCCAAACCTGGGGCTCTTTGTGCCTTTGAAGTCATGGCACTTCTGGATTTTCTGGATGGGTTGAATTATCCTTTAAATCTAGTTGAATCCTGGTCTGGTAATGACCCATGTAAAGGTCCATGGCTGGGACTAAATTGCGATGCTTCTGGAAAGGTGTCAATGATTAATTTGCCCAAATTTAAACTCAATGGTACTCTGAGCCCCTCACTTGCAAACTTAGGTTCTCTTGTTGAGATCAGACTGGAGGGCAACAATCTGAGTGGTCAAATACCTAGTAATTGGACTAGTTTGAGTTCTCTGACACTGTTGGATCTCAGTGACAATAACATTTCCCCTCCACTGCCTCATTTTAGCAGCAAGTTGAAACTTGTGGATGCTGGGAACTCTTTATTGGATGGAAGCCCAGAGGCCCCTTCATCTGGGAACAGCTCATCTTCTGGGAATTCTAGTCCTTCAAGTGATACTCCATCCCCACCAACACGCACAAATCCCAGTCCCAATACTACTGCTAGACCACAAAATTCTAGCAGGAAAATTTTGGTTGCAATTGTAGCCCCTGTTGCAGGTGTTGCGGCAGCAGCTTTTCTGCTCATTCCATTGATATATTGTTTCAAGAGGAGAAAAGATAACTCACTGGCTCCAAGTTCACTAGTAATCCACCCTAGAGATCCATCTGATTCAGACCATATGGTGAAGATTGCTGTGGCTAGCAATACCTATGGAAGCATGTCCACATTAACTGGGAGTGGATCACAAAGTAGAAACAGCAGTGGAACTGGGGAGTCTCATGTCATTGAAGCTGGAAATCTTGTGATATCAGTTCAAGTTCTTCGAAATGTGACTAAGAACTTTGCCCCAGAGAATGAGCTTGGTCGTGGTGGATTTGGTGTCGTATATAAGGGAGAATTGGATGATGGAACTAAAATAGCAGTGAAAAGAATGGAAGCCGGTGTAATCAGTAACAAGGCGTTGGATGAATTTCAGTCTGAAATTGCAGTTCTATCAAAAGTTAGACACCGTCATCTAGTGTCTCTCCTGGGTTACTCTGTTGAAGGTAATGAAAGAATTCTAGTTTATGAGTATATGTCACAAGGGGCTCTCAGCAAACATCTTTTTCAATGGAAGAGCCTTGAGTTGGAGCCACTTTCTTGGAAAAGGAGGCTCAATATTGCATTGGATGTTGCTAGAGGAATGGAGTATCTCCATAGTCTGGCTCATCAGAGCTTCATTCACAGGGATCTTAAGCCCTCCAATATTTTGCTTGGGGATGATTTTAGAGCCAAAGTCTCAGACTTTGGATTGGTTAAACTTGCTCCTGATGGTGAAAAATCTGTAGTAACTCAGCTTGCTGGGACCTTTGGCTACTTAGCCCCAGAATATGCAGTGACGGGAAAAATCACAACCAAAGCAGATGTCTTTAGTTTTGGAGTTGTGCTAATGGAGTTGTTGACTGGGTTGATGGCACTTGATGAGGATAGACCTGAGGAAAGCCAATACTTGCCCGCATGGTTCTGGCATATAAAATCTGATAAGGAGAAATTTATGGCTGCTATTGATCCATCCCTTGACAAAAAAGAAGAAACTTTTGAGAGTATCACTGTCATTGCGGAGCTAGCTGGTCACTGCACTGCAAGAGAACCAAGCCAGCGACCAGATATGGGCCATGCTGTGAATGTTCTGGCTCCACTCGTTGAAAAATGGAAACCCTTTGATGATGAGACTGAGGAGTATTCTGGAATTGATTATAGCCTTCCCCTTAATCAGATGGTGAAAGGTTGGCAAGAGGCAGAAGGAAAGGACTTGAGTTACATGGACCTGGAAGACAGCAAGGGTAGTATCCCCGCAAGGCCCACTGGATTTGCAGATTCTTTTACATCTGCTGACGGCCGCTAG 2874 0.444 MNRAAPAMVERLLKLVAALILSLAVVGFSATDPNDVKILNQFRKGLDNPELLPWPEDGGDPCGSPTWKYIFCKGDRVSQIQAKNLNLSGPLPQNFNQLSMLENIGLQNNKLNGPLPSFSGLSNLRYAYLDYNDFDSIPADFFDGLVSLEALALDYNNFNASTGWQFPPHLQDSSQLTNLSCMSCNLAGPLPSFLGNLSSLSVLKLSNNNLTGEIPATLSGSILQVLWLNDQQNGGITGSIDVVATMTSLTSLWLHGNHFTGTIPKNIGDLTSLKDFNLNSNQLVGEIPDALGKMKLDSLDLNNNHLMGPIPTFAAGKVSDDNNYFCQPKPGALCAFEVMALLDFLDGLNYPLNLVESWSGNDPCKGPWLGLNCDASGKVSMINLPKFKLNGTLSPSLANLGSLVEIRLEGNNLSGQIPSNWTSLSSLTLLDLSDNNISPPLPHFSSKLKLVDAGNSLLDGSPEAPSSGNSSSSGNSSPSSDTPSPPTRTNPSPNTTARPQNSSRKILVAIVAPVAGVAAAAFLLIPLIYCFKRRKDNSLAPSSLVIHPRDPSDSDHMVKIAVASNTYGSMSTLTGSGSQSRNSSGTGESHVIEAGNLVISVQVLRNVTKNFAPENELGRGGFGVVYKGELDDGTKIAVKRMEAGVISNKALDEFQSEIAVLSKVRHRHLVSLLGYSVEGNERILVYEYMSQGALSKHLFQWKSLELEPLSWKRRLNIALDVARGMEYLHSLAHQSFIHRDLKPSNILLGDDFRAKVSDFGLVKLAPDGEKSVVTQLAGTFGYLAPEYAVTGKITTKADVFSFGVVLMELLTGLMALDEDRPEESQYLPAWFWHIKSDKEKFMAAIDPSLDKKEETFESITVIAELAGHCTAREPSQRPDMGHAVNVLAPLVEKWKPFDDETEEYSGIDYSLPLNQMVKGWQEAEGKDLSYMDLEDSKGSIPARPTGFADSFTSADGR 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1288 957 ProSitePatterns Protein kinases ATP-binding region signature. 617 639 IPR017441 GO:0005524
Alju01g1288 957 Pfam Leucine rich repeat 248 306 IPR001611 GO:0005515
Alju01g1288 957 CDD STKc_IRAK 617 890 - -
Alju01g1288 957 MobiDBLite consensus disorder prediction 460 483 - -
Alju01g1288 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Alju01g1288 957 SUPERFAMILY Protein kinase-like (PK-like) 586 887 IPR011009 -
Alju01g1288 957 SUPERFAMILY L domain-like 337 449 - -
Alju01g1288 957 PANTHER OSJNBA0070M12.3 PROTEIN 17 957 - -
Alju01g1288 957 Gene3D Transferase(Phosphotransferase) domain 1 689 908 - -
Alju01g1288 957 FunFam receptor protein kinase TMK1 689 906 - -
Alju01g1288 957 FunFam receptor protein kinase TMK1 573 688 - -
Alju01g1288 957 ProSiteProfiles Protein kinase domain profile. 611 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1288 957 MobiDBLite consensus disorder prediction 934 957 - -
Alju01g1288 957 FunFam Receptor-like kinase TMK4 33 331 - -
Alju01g1288 957 Pfam Protein tyrosine and serine/threonine kinase 614 885 IPR001245 GO:0004672|GO:0006468
Alju01g1288 957 MobiDBLite consensus disorder prediction 455 501 - -
Alju01g1288 957 Gene3D Ribonuclease Inhibitor 32 332 IPR032675 -
Alju01g1288 957 Gene3D Phosphorylase Kinase; domain 1 572 688 - -
Alju01g1288 957 SMART LRR_typ_2 270 294 IPR003591 -
Alju01g1288 957 SMART LRR_typ_2 246 269 IPR003591 -
Alju01g1288 957 SMART LRR_typ_2 121 144 IPR003591 -
Alju01g1288 957 SMART LRR_typ_2 197 221 IPR003591 -
Alju01g1288 957 SMART LRR_typ_2 400 423 IPR003591 -
Alju01g1288 957 SMART LRR_typ_2 424 448 IPR003591 -
Alju01g1288 957 SMART LRR_typ_2 145 168 IPR003591 -
Alju01g1288 957 SUPERFAMILY L domain-like 30 313 - -
Alju01g1288 957 Gene3D Ribonuclease Inhibitor 336 460 IPR032675 -
Alju01g1288 957 FunFam Leucine-rich repeat receptor-like kinase 336 461 - -
Alju01g1288 957 SMART serkin_6 611 891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1288 957 Pfam Leucine rich repeat N-terminal domain 338 374 IPR013210 -
Alju01g1288 957 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1288 Alju-ChrAlju01 10118922 10122292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1288 82 892 Receptor kinase-like Gene Family AT5G07280 31.839 1.67e-86 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Alju01g1288 PK_Tyr_Ser-Thr 3.5e-47 CL0016