Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1267 ATGTGTGGTTTATGGTCTCTTGTAGCCGCATATGCTGGTATTACTAAGGAATTTGTAGTATTCAGAAATTGGATAAATCGTCAATTGGATCATATTGGGGGTGTTTGTATGGCCATGCAAACTGTTTATTTCAAAGAAGCTGAAGGAACTCCCCATAATTCCGCCGGCCATATGTCATCTGTAACTTCGGCCCCCTGGTGGAGCATGTTAGGGTCCCAAACAATTTTTGGCGACTCTTGTGGCCAAATGAAACCTTTTTCACTGGAGATTCCTAACTATGTAGACCAACTTGCTGCCAATAAGCAGGCAGGAGGAGGAGGTGAACAAGTGTTTGATAAAGGACACACCACTCAGTTCGCTATCTTTTCTGATGATCGTAAAATGTCAGGTGATCAGAAGTCTCAAACTGGCATATCACTTCAGTCATCAATTCCTGATCCTCACACTCGTGTTGAGCTGGGAATTAATCAGCCTGTGATCTGTGCAAAATATCCTTATATGGATCAATTTTATGGGCTCTTCTCAGCTTATGGACCTCAAATTCCGGGTCGTATGATGCTGCCACTTAACATGGCATCTGATGATGGACCGATTTATGTTAATGCTAAGCAGTACCATGGAATCATCCGGCGTCGGCAGTCCCGCGCAAAGGCTGTGATGGAGAATAAATTGACCGCACGTCGTAAGCCTTATATGCACGAATCACGCCATCTCCATGCAATGCGCCGCCCAAGAGGATGCGGTGGTCGGTTCCTGAACATGAAAAACTCGAAGAGCGGCTGCAACGCAAGAAGTGGAAGTGAAGGGAACAAAACTGGTGATGGTCAATTGCTGTCCACTGGTTCTCAAAGCTCTGAAGTGCTGCAGTCATCAAAGGATAATGGTAGCAGCAGTCCTCACATGTGTGGGTCAGAGGTAACTAGCACATACACAAGGGGAGGTCTTGATCACGGCTTCCCATTCAACCATCTTGGACCAGCTGTTCATCACACTCTTGCAGGCATGATGGATGGTCACCACAGCGGCAGTGGCAGCATGGTTATGCCCACCAAATGGGTTGCAGCACCAGGAAAATGCTGCAGCCTGAAAGTTTGA 1095 0.4676 MCGLWSLVAAYAGITKEFVVFRNWINRQLDHIGGVCMAMQTVYFKEAEGTPHNSAGHMSSVTSAPWWSMLGSQTIFGDSCGQMKPFSLEIPNYVDQLAANKQAGGGGEQVFDKGHTTQFAIFSDDRKMSGDQKSQTGISLQSSIPDPHTRVELGINQPVICAKYPYMDQFYGLFSAYGPQIPGRMMLPLNMASDDGPIYVNAKQYHGIIRRRQSRAKAVMENKLTARRKPYMHESRHLHAMRRPRGCGGRFLNMKNSKSGCNARSGSEGNKTGDGQLLSTGSQSSEVLQSSKDNGSSSPHMCGSEVTSTYTRGGLDHGFPFNHLGPAVHHTLAGMMDGHHSGSGSMVMPTKWVAAPGKCCSLKV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1267 364 MobiDBLite consensus disorder prediction 126 145 - -
Alju01g1267 364 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 99 301 IPR001289 GO:0003700|GO:0006355
Alju01g1267 364 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 197 251 IPR001289 GO:0003700|GO:0006355
Alju01g1267 364 MobiDBLite consensus disorder prediction 258 304 - -
Alju01g1267 364 Gene3D - 194 256 - -
Alju01g1267 364 ProSiteProfiles NF-YA/HAP2 family profile. 194 254 IPR001289 GO:0003700|GO:0006355
Alju01g1267 364 SMART cbf3 193 254 IPR001289 GO:0003700|GO:0006355
Alju01g1267 364 PRINTS CCAAT-binding transcription factor subunit B signature 197 219 IPR001289 GO:0003700|GO:0006355
Alju01g1267 364 PRINTS CCAAT-binding transcription factor subunit B signature 228 251 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1267 Alju-ChrAlju01 9944066 9947537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1267 18 364 CCAAT-HAP2 Transcription Factor Family AT3G05690 37.931 2.27e-52 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Alju01g1267 CBFB_NFYA 1.1e-25 No_clan