Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1261 ATGACCCGTTCCTCGGAGAAGATCCGCCTTTCTTCTCTGGTCGTCAAACCGACCCGTCTTCTCTCTCAGAAGCTTACTCTCTTCTCTCTCTCTACCTTCCATCTCTGCAAGTCCCTTGCTCGCTCCATACTCTCCAAAACCCTCTCCTTCCTCGCCATGGACAGTTTATTCTCGGATCGCGACGATTTCTTCTGGGACCTCGATTCCCGCCCCCAACGTCGCTTCGTCCGAGACGAAGAGCCTCAATTGGAGAATGAGCCCCTCTACTTGGTTCTTTACGGGTGGTGGAAGGAAGTACAAGGGGATGCTGATCGAGTAGAACATGTCCTATACACAGTATCATCGAACTATGATTTTGAGTGTGACTCAGAAATTTTGCTTCAGTTAAGGAAGGAAGACGACCGGGAGGAAACGATGAATAGTGATGTGGGATCTTCAGGCCGTCAATATGCGTTGGTTCCTGAAGGTTTGTGGTTGCGTGCTCTTCAAAGGTGTAGTGATAATAATAATGCAGTGAAGGATTTTGGAAGCCTCTTCTATGCAGATGATTATTTGCCAGATTTGTTTTACTTGCAAGTTAGGATATTTTTTTCATGGGAAACAAATTCATTGGAGGCAAAGATAAGCCAAAAGGAAAATGGGGTTGATGTCTACATGAAGGCCCGCAATATTTTCAGCTCTGAATATAACCCAGTACACATTTTGGACTTCTCTGGCCAGACAGCTCAATTTTTCATAGACAATAATGAGGATTCTGGGCAACTTGGAAAAGGGGTTCTCCTGGAGCTGCAAGTTTATGGACTTTCTGATTCTATAAAGGTTAATGGAAGCAATGATATGTTTGTAGATGGACCTACAGTGGGATGTTCGTCTCATGGTGGTTCTGTTATGATGAATGGGACCACTCACAATGTGAATTCCAATGTAACAAATATCAACTCCTTTCAAAGGAGCAGCTATAAATCAGTTGGTTCTTTGGGCTTGAAAGGATTACAGAATCTTGGAAACACTTGTTTTATGAACAGCGCCATTCAATGTCTGGTTCACACCCCCAAGCTTGTCGACTATTTCCTGGGAGATTACCGGAAAGAAATAAATTATGAAAATCCCTTGGGAATGAATGGAGAACTTGCTTTAGCTTTTGGGGATTTACTTAGAAAGTTGTGGTTTCCTGGAGCAAGGCCTGTGGCACCAAGAATGTTCAAGATGAAGCTTGCTAATTTTGCCCCCCAATTTAGTGGTTATAACCAGCATGATTCTCAAGAACTTCTTGCTTTTTTGTTGGATGGACTCCATGAAGACCTTAATCGTGTAAAGCGCAAACCATATCACGAAGTTAAAGATGAAGATGGTCGTCCCGATGAAGAAGCGGCAGAAGAATATTGGCATAATCACCTTGCTCGCAATGACTCCATAATAGTTGATTTGTGCCAAGGTCAGTTCCGTTCAACATTGGTATGCCCTGTTTGCAAGAAGGTTTCTATCACTTTTGACCCTTTTATGCACCTATCTTTGCCATTACCTTCCACAACAATGCGGACAATTACTTTGACTGTCCTGAGCACTGATGGAACTGTCCTGCCTTCCACATTTACCATAACATTGCCCAAGAGTGGATTATTGAAGGATCTAATCGAGGCCTTAGGTGATGCATGTTCCTTAAGAGATGACGAGACACTCTTGGTAGCTGAGATATACAAGAATTGCATCTGTCGTTGGTTGGAGGAACCATCTGATTCATTAGCATTGATTAGAGATCAGGACAAACTAGTTGCTTATCGATTGCCAAAAGATGAGGCTGGCCCCTTGTTTGTTTTCATGCATCAGCAGGTGACGAAGCAGTGCATTTTGGGGAGTGAGAAGTTGGTAGAAAGTTTGTGTGGCATTCCTATTGTGGCAAGGTTGCCCAATGTTTCCTGTGGATATGATATTCATAGGGAGTTTCTGAAGTTAATTAATCCATTTCTGATGCCCTCAGAAGATTTCTTAGATGAGCATGATAATGATATTGAAGTTAGTAAAGATAATGAGTTGAGTGATGCCACTTGTTCAGCGTGCTTAGAAAGTGATTCAGATTCAGATTTGGAGGTTGACTTTAAATTCTACTTAATTGCACCACCACTAGGAATGGAGAATGTGGAGATAAAAATGAATGAACCCTTGCCGTCCCCACAGCTACCCAAAAGGTTGGAGGTTTCTGTCTTATGGTCAGATAAGATGATAGAAAAATATGATACATGCCTACTCAGCTCATTGCCTGAGGTTTTCAAGCCACAGTTATTCTCCAGGAGAACACAAGAATCTGTTTCTGTTTACAAGTGCCTTGAAGCATTCTTAAAAGAGGAGCCTCTTGGGCCAGATGACATGTGGTTCTGTCCTAAATGCAAAAAGCCTCAGCAAGCGACCAAAAAACTAGATCTTTGGAGATTACCTGAAATTCTTGTTGTTCATTTGAAGAGGTTTTCATTCGGCCGATACTTCAAGAACAAGCTGGAAACTTTCGTCGACTTCCCAATCAATGATTTGGACCTGTCAACGTATGTTGCCCATAAGAATGGCCAGTCTTCCCCCCATTATGAGTTGTATGCAATCAGCTGTCATTATGGATGCTTGGGAGGAGGTCATTATACAGCATTTGTTCGTTATGGACATGATAAATGGTACGAGTTTGATGATAGCAGGGTTGTGCCTATCAGCGAGGACATGGTAAAAACTTCTGCTGCTTACGTTCTTTTCTACAGGAAAGTTTAA 2751 0.4246 MTRSSEKIRLSSLVVKPTRLLSQKLTLFSLSTFHLCKSLARSILSKTLSFLAMDSLFSDRDDFFWDLDSRPQRRFVRDEEPQLENEPLYLVLYGWWKEVQGDADRVEHVLYTVSSNYDFECDSEILLQLRKEDDREETMNSDVGSSGRQYALVPEGLWLRALQRCSDNNNAVKDFGSLFYADDYLPDLFYLQVRIFFSWETNSLEAKISQKENGVDVYMKARNIFSSEYNPVHILDFSGQTAQFFIDNNEDSGQLGKGVLLELQVYGLSDSIKVNGSNDMFVDGPTVGCSSHGGSVMMNGTTHNVNSNVTNINSFQRSSYKSVGSLGLKGLQNLGNTCFMNSAIQCLVHTPKLVDYFLGDYRKEINYENPLGMNGELALAFGDLLRKLWFPGARPVAPRMFKMKLANFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKRKPYHEVKDEDGRPDEEAAEEYWHNHLARNDSIIVDLCQGQFRSTLVCPVCKKVSITFDPFMHLSLPLPSTTMRTITLTVLSTDGTVLPSTFTITLPKSGLLKDLIEALGDACSLRDDETLLVAEIYKNCICRWLEEPSDSLALIRDQDKLVAYRLPKDEAGPLFVFMHQQVTKQCILGSEKLVESLCGIPIVARLPNVSCGYDIHREFLKLINPFLMPSEDFLDEHDNDIEVSKDNELSDATCSACLESDSDSDLEVDFKFYLIAPPLGMENVEIKMNEPLPSPQLPKRLEVSVLWSDKMIEKYDTCLLSSLPEVFKPQLFSRRTQESVSVYKCLEAFLKEEPLGPDDMWFCPKCKKPQQATKKLDLWRLPEILVVHLKRFSFGRYFKNKLETFVDFPINDLDLSTYVAHKNGQSSPHYELYAISCHYGCLGGGHYTAFVRYGHDKWYEFDDSRVVPISEDMVKTSAAYVLFYRKV 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1261 916 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 280 915 - -
Alju01g1261 916 SUPERFAMILY Cysteine proteinases 327 915 IPR038765 -
Alju01g1261 916 Gene3D Cysteine proteinases 313 532 - -
Alju01g1261 916 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 329 916 IPR028889 -
Alju01g1261 916 Pfam Ubiquitin carboxyl-terminal hydrolase 330 913 IPR001394 GO:0004843|GO:0016579
Alju01g1261 916 Gene3D Cysteine proteinases 667 916 - -
Alju01g1261 916 CDD Peptidase_C19R 744 914 - -
Alju01g1261 916 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 859 876 IPR018200 GO:0004843|GO:0006511
Alju01g1261 916 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 330 345 IPR018200 GO:0004843|GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1261 Alju-ChrAlju01 9852428 9860009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1261 770 916 Miscellaneous Gene Families AT4G31670 35.333 2.76e-19 91.3