Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1256 ATGGGCAACAACTGTGTTGGATCAAGAATCTCCAGGGATGCGTTATTTCCCTCCATTTCCAGTTCACTTTGGTGGTCACGACCAACAGGGGATATGGTTTCTCCTACCAGTAAATCATCCTCCAGAAGCGAAGGTCCAGATGTTTCAGAGACTGTTCAAAACAGCCCACCCGAGGTATTCAGAATCCATAAGGTAGAGACGAAACCAATACAGGAGATAAAACCACCTCAACCTCAAAAACAGGACAAAGAGATCATATCTTCCAAACCACAAAAGCAGGACGAAGAAATTATATCTTCCAAGCCTGCAATGGAGAAACCTAGACTACCACAGTCGATGAAGCTGAGGCACACGGAAGAGGGTGGACCGATTCCGATGAATGTACAGAAGGAAGAGATTGTTCAACAAGTGGAACCTACAAAACCAAAGAAGCCCCACAAGGTGAAGAGGTTCGCATCAGCTGGGCTGGAAGCAGATTCTGTTTTGCAGACAAAAACTGGTCATCTTAAGGAGTTTTATAAACTGGGACAAAAGCTCGGACATGGACAATTTGGAACGAGTTTCCTTTGTGTGGAGAAAGCTACAGGTATAGAGTATGCCTGCAAGTCCATTGCTAAGCGAAAATTGCTAACGCGTGAAGATGTGGAGGATGTGAGGAGGGAGATTCAGATAATGCATCACTTAGCAGGATGTCCAAATGTGATATCCATAAAAGGGGCTTATGAGGATCCTGTGGCAGTTCATGTTGTGATGGAACTATGTGAAGGGGGTGAGCTGTTTGATCGGATTGTGGAAAGAGGGCATTACACTGAAAGAAAAGCAGCAAAACTTGCCAGGACTATAGTGAGTGTTATAGAAGCATGTCACTCCCTTGGAGTCATGCATCGTGATCTTAAGCCTGAAAATTTTCTTTTTGTTAGTAAGGATGAAGATTCCCCCCTTAAGGCTATCGATTTTGGATTGTCCACATTTTTCAAACCAGGAGAAACTTTCGCGGACGTTGTAGGAAGTCCTTATTATGTTGCACCAGAAGTTCTGTGCAAGTGTTATGGTCCAGAAGCAGATGTGTGGAGTGCTGGTGTGATGATTTATATTCTGCTATGTGGAGTGCCTCCATTTTGGGCTGAAACAGAGGAGGATATATTCAAGGAGGTTTTGGATGGGAATCTTGATTTCTCGTCAGATCCTTGGCCTAAAATCTCGGACAGTGCTAAAGACTTGGTGAGAAAGATGCTCACTAGAAATCCTAGGAAACGGATAAGTGCTCATGAAGTTCTTTGCCATCCTTGGATACGAATTAATGGAGAAGCTCCAGATAAACCTCTTGATTCAGCAGTCTTGAGTCGCCTGAAGCAGTTTTCTGCCATGAATAAGCTCAAGAAAATGGCCATAAGAGTGATTGCAGAGAAGCTCTCTGAAGAAGAAATAGCTGGATTGAAAGAAATTTTTAAGATGATAGACACAGACAACAGTGGTCAAATTACGTTTGATGAACTAAAGAATGGACTGAAAAGATTTGGTGCTGATCTAAATGAATCAGAAATACAAGATTTAATGCAAGCAGCAGATGTTGATAACAGTGGAACAATAGACTACAAAGAATTCATAGCAGCCACATTGCATTTTAATAAAATTGAGAGGGAAGATCACTTAGTTGCAGCTTTCTCATACTTCGATAAAGATGGAAGCGGCTATATTACACCAGATGAGCTTCAACAAGCTTGCCAAGAATTTGGCATAGAAGATTTCCACTTAGAAGAAATAATCAGAGAAGCAGATCAAGATAACGATGGGCAAATAGATTACAAGGAATTTGTGGCGATGATGCAGAGAGGGAACACAGAGATAGGGAAAAAGGGTCAAAGAGGTAGCAATATATTTAAGATTGGATATAGGGAGGCTCTATCAGTGTATTAA 1917 0.4189 MGNNCVGSRISRDALFPSISSSLWWSRPTGDMVSPTSKSSSRSEGPDVSETVQNSPPEVFRIHKVETKPIQEIKPPQPQKQDKEIISSKPQKQDEEIISSKPAMEKPRLPQSMKLRHTEEGGPIPMNVQKEEIVQQVEPTKPKKPHKVKRFASAGLEADSVLQTKTGHLKEFYKLGQKLGHGQFGTSFLCVEKATGIEYACKSIAKRKLLTREDVEDVRREIQIMHHLAGCPNVISIKGAYEDPVAVHVVMELCEGGELFDRIVERGHYTERKAAKLARTIVSVIEACHSLGVMHRDLKPENFLFVSKDEDSPLKAIDFGLSTFFKPGETFADVVGSPYYVAPEVLCKCYGPEADVWSAGVMIYILLCGVPPFWAETEEDIFKEVLDGNLDFSSDPWPKISDSAKDLVRKMLTRNPRKRISAHEVLCHPWIRINGEAPDKPLDSAVLSRLKQFSAMNKLKKMAIRVIAEKLSEEEIAGLKEIFKMIDTDNSGQITFDELKNGLKRFGADLNESEIQDLMQAADVDNSGTIDYKEFIAATLHFNKIEREDHLVAAFSYFDKDGSGYITPDELQQACQEFGIEDFHLEEIIREADQDNDGQIDYKEFVAMMQRGNTEIGKKGQRGSNIFKIGYREALSVY 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1256 638 ProSitePatterns EF-hand calcium-binding domain. 523 535 IPR018247 -
Alju01g1256 638 ProSiteProfiles Protein kinase domain profile. 173 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1256 638 SMART serkin_6 173 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1256 638 FunFam Calcium-dependent protein kinase SK5 259 443 - -
Alju01g1256 638 MobiDBLite consensus disorder prediction 21 105 - -
Alju01g1256 638 ProSiteProfiles EF-hand calcium-binding domain profile. 546 581 IPR002048 GO:0005509
Alju01g1256 638 SMART efh_1 550 578 IPR002048 GO:0005509
Alju01g1256 638 SMART efh_1 478 506 IPR002048 GO:0005509
Alju01g1256 638 SMART efh_1 584 612 IPR002048 GO:0005509
Alju01g1256 638 SMART efh_1 514 542 IPR002048 GO:0005509
Alju01g1256 638 Pfam Protein kinase domain 173 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1256 638 ProSiteProfiles EF-hand calcium-binding domain profile. 510 545 IPR002048 GO:0005509
Alju01g1256 638 Gene3D Phosphorylase Kinase; domain 1 175 258 - -
Alju01g1256 638 PANTHER SERINE/THREONINE-PROTEIN KINASE 163 605 - -
Alju01g1256 638 Pfam EF-hand domain pair 479 539 IPR002048 GO:0005509
Alju01g1256 638 Pfam EF-hand domain pair 550 610 IPR002048 GO:0005509
Alju01g1256 638 ProSiteProfiles EF-hand calcium-binding domain profile. 474 509 IPR002048 GO:0005509
Alju01g1256 638 MobiDBLite consensus disorder prediction 85 102 - -
Alju01g1256 638 ProSiteProfiles EF-hand calcium-binding domain profile. 584 615 IPR002048 GO:0005509
Alju01g1256 638 FunFam Calcium-dependent protein kinase 1 439 613 - -
Alju01g1256 638 FunFam Calcium-dependent protein kinase 1 175 258 - -
Alju01g1256 638 Gene3D Transferase(Phosphotransferase) domain 1 259 455 - -
Alju01g1256 638 CDD STKc_CAMK 172 430 - -
Alju01g1256 638 MobiDBLite consensus disorder prediction 21 56 - -
Alju01g1256 638 ProSitePatterns EF-hand calcium-binding domain. 559 571 IPR018247 -
Alju01g1256 638 Gene3D - 456 615 - -
Alju01g1256 638 ProSitePatterns EF-hand calcium-binding domain. 487 499 IPR018247 -
Alju01g1256 638 SUPERFAMILY Protein kinase-like (PK-like) 172 432 IPR011009 -
Alju01g1256 638 SUPERFAMILY EF-hand 470 611 IPR011992 -
Alju01g1256 638 ProSitePatterns EF-hand calcium-binding domain. 593 605 IPR018247 -
Alju01g1256 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 293 305 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1256 Alju-ChrAlju01 9824192 9827033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1256 1 613 EF-hand Containing Proteins AT3G10660 65.660 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Alju01g1256 Pkinase 1.2e-72 CL0016