Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1255 ATGTGCAGTGGGCAACAAAAGATTACATTTTCTGGCTCTGAAGTTTGGGCTGATGTATTGAAGGTTACGGACATGGAAGTCAAGAACAATGGAAGTCATATGACATCAGTTGCAGCCTTTGTGGAAGGGGGCATTCAAGAAGCATGTGATGACTCTTGCAGCATATGCCTTGAGGATTTTAGTGAAAACAATCCGTCAACGGTTACGACCTGCAAGCATGATTTTCACCTGCAGTGCATTCTTGAATGGTGTCAGAGGAGCTCCCAGTGCCCTATGTGTTGGCAGTCTCTTAGTTTCAAGGATTCGACCAGTCAAGAATTGTTTGAGGCTGTGGTTCATGAAAGGGATTTGAGAGCTACTTCATCAAGAAATGCAACTATTTTCCAACATCTGGCTTTTGGTGATTTTGACTTGCAGCATTTATTATCCATCGGAGTAAGCGAAGCAGATATTGAAGAGAGGATAATTCAACATTTAGCTGCTGCCACAGTCATGGGAAGAGCCCACCATCTTGGTCGGAGAGAAGGAAATAGGACCAGGTCATATCCTCTTGGTCGTCCTCCCTTCATAGTGTTCTCAACTCCTCCGCCAGGTGCTGTTTCAGCTGCTGGAGGGGGTACCGAACCAACTGCAATTCCTGTAGGAAATCCATCTAGCCCACTTAATTCTGAAGGAGATGAGCCATCACAGCAGATCCCAAGCCTTCAAACACAAAGTTCTTTACCTTCTGGATCTACTGTCAGGGCGACAAATTGTCAAGGAATTCTTTCTAATGATCGAAGCTCTACTGTCCAATCTGCACCACCTGACCAAGGCAGAGCAGGGCCATCGGAACTTCAGTCATTTTCTGAGTCTCTGCGATCCAGACTTGGTTCAGTGTCTATGAGATACAAAGAGACTATATCAAAAGGCGCGAGGGGATGGAGGGAAAGGCTGTTCTCTCGTGGTACTTCCATGTCCGATATTGGTTCAGAAGTTAGGAGAGAGTTTAATGCTGGAATTGCAAGTGTATCCCGATTGATGGAGCGCCTTGAAACAAGAGAAAATAACGATAGAGCAGGGGATAGTTCTTTGTCAAATCATTTGGCTGCAGAGACAAGCAACCCAAACAATGGTGAAGCTCGTGAGGTTAACACTCAGCATGACAACACTCCAGCCGCTTGTTCTGCGGGCCCACGAGTAGGCATCAATGGGGTTCTAGAAGGAGTCTCCAATGTTTGCCTTTCATTTCCATCTGTTGCAATAACTACCTCCCAAGTCTTCTCTTCTTCTTCTTCTTCCTCCTCCCGCGTGTCTCTTCCCATTAAGTTATCTCCCTCCCTCTTCACCAAACAGACTACCCCACTTCACTTTCCCCTTCCCTTATTCTTCAATTCAGGCCCTCCTTCCTCTCTCACCCCCAACACCATGGCCTCCCTCCCTTCCTCCTCCTCTCCTCTTGTTCTCTGCCTTCTCTTCCTTTCCCTTCTTCCCTTCCTCTACGCCCAGAAGCTCCCTTCTTCTTCCGGCTCCGGTCAGATTAATTCCAACTCTATTCTCGTCGCTCTTCTTGATTCCCATTATACTGAGCTCGCTGAGCTTGTCGAGAAAGCTCTTCTCCTCCAGAAACTTGAGGATACCGTTGGCGCCAACAATATCACCGTCTTCGCCCCGCGAAATGAAGCTCTTGAGCGCCAGCTCGACCCCGAGTTTAAGCGCTTCCTGCTTGAGCCCGGGAATCTCAGGTCCTTGCAGACTCTTCTCATGCATCACATTGTGCCCAAACGAATCGGTTCCAATGATTGGCCCGCTGAGAGTTCTGGAGCTGTTCCGCATCAGACCTTGTGCAATGACCACGTGCATTTGGCCAGCAAGGCTCCTGCCAGTAAGGTTGTTGGTTTGGCCGAGATCGTTCGCCCCGACGACGTCGTTCGTCCTGACGGTGTGATTCACGGCATTGAGCGGCTTTTGGTTCCGCGATCAGTGCAGGAGGATTTCAATCGCCGACGGAATTTGCGGGATATATCGGCGGTGATCCCTGAGGGTGCGCCGGAGGTGGATCCCCGAACCCACCGGTTGAAGAAACCAGCTCCTGTACCTGCCGGGGCTCCTCCTGTGTTGCCCATTTACGACGCCATGGCCCCGGGTCCTTCGCTAGCTCCTGCACCGGCACCCGGACCCGGTGGTCCTCATGGTCACTTCAATGGTATGCGCCAGGTGAAAGACTTCATTCACACCCTGTTGCATTACGGTGGCTACAATGAAATGGCAGATATTCTGGTTAACTTGACATCTTTGGCCACCGAAATGGGAAGGTTAGTCTCGGAGGGTTATGTCCTGACGGTGTTGGCTCCCAATGACGAGGCCATGGCGAAGCTAACCACAGACCAATTGAGTGAACCGGGTGCACCAGAGCAAATAATCTACTATCATATCATTCCGGAGTATCAGACAGAGGAGAGTATGTACAATGCCGTGAGGAGGTTTGGGAAAGTTCAGTATGACACCCTGCGGTTGCCACACAAGGTTGTGGCTCAGGAGGCTGATGGGTCTGTGAAGTTTGGGCAAGGTGAAGGGTCTGCATATCTGTTTGATCCTGATATATATACGGATGGGAGAATTTCAGTACAGGGTATTGATGGAGTTCTTTTCCCGGTCGAAGAGGAGCCAAATACTGAGCGAAAAGCAGTACCGGTCGTCAAAGTTGCTACCAAACCAAGGAGAGGGAAGTTGCTGGAAGTAGCTTGTAGTATGCTTGGAGCTTTCGGACGAGCCTGTTAA 2760 0.4967 MCSGQQKITFSGSEVWADVLKVTDMEVKNNGSHMTSVAAFVEGGIQEACDDSCSICLEDFSENNPSTVTTCKHDFHLQCILEWCQRSSQCPMCWQSLSFKDSTSQELFEAVVHERDLRATSSRNATIFQHLAFGDFDLQHLLSIGVSEADIEERIIQHLAAATVMGRAHHLGRREGNRTRSYPLGRPPFIVFSTPPPGAVSAAGGGTEPTAIPVGNPSSPLNSEGDEPSQQIPSLQTQSSLPSGSTVRATNCQGILSNDRSSTVQSAPPDQGRAGPSELQSFSESLRSRLGSVSMRYKETISKGARGWRERLFSRGTSMSDIGSEVRREFNAGIASVSRLMERLETRENNDRAGDSSLSNHLAAETSNPNNGEAREVNTQHDNTPAACSAGPRVGINGVLEGVSNVCLSFPSVAITTSQVFSSSSSSSSRVSLPIKLSPSLFTKQTTPLHFPLPLFFNSGPPSSLTPNTMASLPSSSSPLVLCLLFLSLLPFLYAQKLPSSSGSGQINSNSILVALLDSHYTELAELVEKALLLQKLEDTVGANNITVFAPRNEALERQLDPEFKRFLLEPGNLRSLQTLLMHHIVPKRIGSNDWPAESSGAVPHQTLCNDHVHLASKAPASKVVGLAEIVRPDDVVRPDGVIHGIERLLVPRSVQEDFNRRRNLRDISAVIPEGAPEVDPRTHRLKKPAPVPAGAPPVLPIYDAMAPGPSLAPAPAPGPGGPHGHFNGMRQVKDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKVQYDTLRLPHKVVAQEADGSVKFGQGEGSAYLFDPDIYTDGRISVQGIDGVLFPVEEEPNTERKAVPVVKVATKPRRGKLLEVACSMLGAFGRAC 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1255 919 SUPERFAMILY FAS1 domain 509 653 IPR036378 -
Alju01g1255 919 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 103 IPR013083 -
Alju01g1255 919 Gene3D FAS1 domain 513 652 IPR036378 -
Alju01g1255 919 SUPERFAMILY RING/U-box 45 101 - -
Alju01g1255 919 SMART fasc_3 774 879 IPR000782 -
Alju01g1255 919 SMART fasc_3 547 653 IPR000782 -
Alju01g1255 919 MobiDBLite consensus disorder prediction 355 386 - -
Alju01g1255 919 ProSiteProfiles FAS1/BIgH3 domain profile. 508 650 IPR000782 -
Alju01g1255 919 FunFam Fasciclin-like arabinogalactan protein 16 728 879 - -
Alju01g1255 919 Pfam Ring finger domain 51 93 IPR001841 -
Alju01g1255 919 MobiDBLite consensus disorder prediction 212 282 - -
Alju01g1255 919 Gene3D FAS1 domain 753 878 IPR036378 -
Alju01g1255 919 MobiDBLite consensus disorder prediction 168 282 - -
Alju01g1255 919 ProSiteProfiles FAS1/BIgH3 domain profile. 733 861 IPR000782 -
Alju01g1255 919 ProSiteProfiles Zinc finger RING-type profile. 53 93 IPR001841 -
Alju01g1255 919 SMART ring_2 53 93 IPR001841 -
Alju01g1255 919 Pfam Fasciclin domain 520 652 IPR000782 -
Alju01g1255 919 Pfam Fasciclin domain 768 878 IPR000782 -
Alju01g1255 919 SUPERFAMILY FAS1 domain 712 879 IPR036378 -
Alju01g1255 919 MobiDBLite consensus disorder prediction 347 386 - -
Alju01g1255 919 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 487 919 IPR044654 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1255 Alju-ChrAlju01 9808446 9815574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1255 50 101 C3H Transcription Factor Family AT4G00335 48.077 4.32e-13 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1255 01 9808446 9815574 Alju01g1255 01 9808446 9815574 ECH