Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1248 ATGGGAAATAAGTGTGCCGGACCAAACCCTGGCGGGAATGGTTTCTTCCATTTTGCTTCGGCCGCTGTTTGGCGAGACCGCCCTCCGGCCGGCGGGCTTCCTCCACCGGATGCCACCGCCACCACCGATAAAAATCCGGCAAATGCAGGTCCTGATTCCTCCGAAGATTCCGCTGCTCGCAAAGGTTCTGATCCTTCGGGCTCAGGTCAGACTATCGCCGACGTCGAATTGAATCCACGGGAGCCTGAAAATCCTCCCGCTGATGTCGCGAAAGCTGACAAATCCACTCATGTTAAAAGCGCGTCTAGTGTTGGACGTCAAATTGAATCGGTGTTGGGAAGAAAAACTCTAAACTTGAAGGATGTGTATAGCCTGGGGCGGAAGCTAGGGCAAGGACAATTTGGGACGACATTCTTTTGTATAGAGAAGGCAACTGGAAAAGAGTTCGCTTGTAAAACGATCGCCAAGAGAAAATTGACAACTCTTGAGGACGTGGAGGATGTTAGAAGGGAGATTCAGATAATGCACCATTTGGCTGGTCACCCAAATGTGATACAAATAGTTGGTGTTTATGAGGACGCCGTTGCCATCAATCTTGTTATGGAACTTTGTTCTGGTGGGGAGCTTTTTGACAGGATCATACAGAGAGGACGCTACACTGAGAGAAAGGCGGCTCAACTCGCAAGGGTAATAGTCCAAGCTGTGGAGGCCTTCTATTCTTTGGGTGTCATGCATCGGGACTTGAAGCCAGAGAATTTTCTGTTCGCTAGCCAGGAAGAAGATTCACTTCTCAAGACTATAGATTTTGGGCTTTCTGTGTTCTTCCAACCGGGTCAAATATTCACTGATATAGTTGGCAGCCCATATTATGTGGCCCCTGAAGTTCTGCTGAAGCACTATGGTCAAGAATGTGATGTTTGGAGTGTTGGGGTGATCATTTATATATTACTATGTGGAGTTCCTCCATTTTGGGCTGAGACTCAGGAAGGAATTTTTGAGCAAATTTTGGAAGGAGAACTTGACTTTACCTCTGAACCATGGCCTAGTATATCTGAGAGTGCAAAGGACCTTGTCCGTAGTATGCTAATAAGGGACCCTAAAAAGAGGATGACAGCACATGAAGTTCTTTGCCACCCTTGGGTTCAGGTGGACGGTGTTGCTCCTGACAAACCTCTTGATTCTGCTGTCTTGTCTCGTTTGAGAAAATTTTCTGCTATGAACAAGCTTAAGAAGATGGCCATTCGAGTAATTGCTGAAAGTCTGTCTGAGGAGGAAATTGGAGGGCTGAAACAAATGTTCAAGATGATAGACGCAGATGATAGCGGACACATTACTCTTGAGGAACTGAAAGATGGATTGGAGAAAGCAGGTGCCAATCTCAAGGAACCTGAAATTGTTGGCTTATTGCAAGCGGCAGATTTTGACAATAGTGGTACTATCGACTATTGTGAATTCATAGCAGCAATGCTTCAAATGAACAAGGTTCATAGGGAGGAGTATCTATTTGCAGCTTTCAACTACTTTGACAAAGATAGTAGTGGGTACATTACACGAGATGAACTTGAACATGCCTGCCAACAGTTTGGTCTGCAAGATGTTCAACTAGATGACATGATAAAAGAAGTTGACCGGGATAATGATGGGCGAATTGATTACAGTGAGTTTGTTACAATGATGGAAGACGCTGGTATTGGCAAAAAGGGACTGGAAAATACTATGAGCAAAATTGTGGGTGCTTTCAATCATCAGTGA 1752 0.4532 MGNKCAGPNPGGNGFFHFASAAVWRDRPPAGGLPPPDATATTDKNPANAGPDSSEDSAARKGSDPSGSGQTIADVELNPREPENPPADVAKADKSTHVKSASSVGRQIESVLGRKTLNLKDVYSLGRKLGQGQFGTTFFCIEKATGKEFACKTIAKRKLTTLEDVEDVRREIQIMHHLAGHPNVIQIVGVYEDAVAINLVMELCSGGELFDRIIQRGRYTERKAAQLARVIVQAVEAFYSLGVMHRDLKPENFLFASQEEDSLLKTIDFGLSVFFQPGQIFTDIVGSPYYVAPEVLLKHYGQECDVWSVGVIIYILLCGVPPFWAETQEGIFEQILEGELDFTSEPWPSISESAKDLVRSMLIRDPKKRMTAHEVLCHPWVQVDGVAPDKPLDSAVLSRLRKFSAMNKLKKMAIRVIAESLSEEEIGGLKQMFKMIDADDSGHITLEELKDGLEKAGANLKEPEIVGLLQAADFDNSGTIDYCEFIAAMLQMNKVHREEYLFAAFNYFDKDSSGYITRDELEHACQQFGLQDVQLDDMIKEVDRDNDGRIDYSEFVTMMEDAGIGKKGLENTMSKIVGAFNHQ 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1248 583 SMART serkin_6 123 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1248 583 SUPERFAMILY EF-hand 421 559 IPR011992 -
Alju01g1248 583 Gene3D Transferase(Phosphotransferase) domain 1 209 386 - -
Alju01g1248 583 Gene3D Phosphorylase Kinase; domain 1 125 208 - -
Alju01g1248 583 FunFam Calcium-dependent protein kinase 1 389 563 - -
Alju01g1248 583 ProSitePatterns EF-hand calcium-binding domain. 543 555 IPR018247 -
Alju01g1248 583 ProSitePatterns Protein kinases ATP-binding region signature. 129 156 IPR017441 GO:0005524
Alju01g1248 583 CDD EFh 500 559 IPR002048 GO:0005509
Alju01g1248 583 ProSiteProfiles EF-hand calcium-binding domain profile. 460 495 IPR002048 GO:0005509
Alju01g1248 583 ProSiteProfiles EF-hand calcium-binding domain profile. 424 459 IPR002048 GO:0005509
Alju01g1248 583 CDD STKc_CAMK 122 380 - -
Alju01g1248 583 ProSiteProfiles EF-hand calcium-binding domain profile. 530 565 IPR002048 GO:0005509
Alju01g1248 583 ProSiteProfiles Protein kinase domain profile. 123 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1248 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Alju01g1248 583 FunFam Calcium-dependent protein kinase SK5 209 393 - -
Alju01g1248 583 ProSitePatterns EF-hand calcium-binding domain. 473 485 IPR018247 -
Alju01g1248 583 MobiDBLite consensus disorder prediction 25 104 - -
Alju01g1248 583 ProSitePatterns EF-hand calcium-binding domain. 437 449 IPR018247 -
Alju01g1248 583 FunFam Calcium-dependent protein kinase 1 125 208 - -
Alju01g1248 583 SUPERFAMILY Protein kinase-like (PK-like) 123 382 IPR011009 -
Alju01g1248 583 Gene3D - 388 562 - -
Alju01g1248 583 SMART efh_1 428 456 IPR002048 GO:0005509
Alju01g1248 583 SMART efh_1 534 562 IPR002048 GO:0005509
Alju01g1248 583 SMART efh_1 500 528 IPR002048 GO:0005509
Alju01g1248 583 SMART efh_1 464 492 IPR002048 GO:0005509
Alju01g1248 583 Pfam EF-hand domain pair 499 560 IPR002048 GO:0005509
Alju01g1248 583 Pfam EF-hand domain pair 429 489 IPR002048 GO:0005509
Alju01g1248 583 PANTHER SERINE/THREONINE-PROTEIN KINASE 113 555 - -
Alju01g1248 583 ProSiteProfiles EF-hand calcium-binding domain profile. 496 529 IPR002048 GO:0005509
Alju01g1248 583 CDD EFh 429 489 IPR002048 GO:0005509
Alju01g1248 583 Pfam Protein kinase domain 123 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1248 Alju-ChrAlju01 9754708 9758530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1248 1 570 EF-hand Containing Proteins AT2G38910 68.729 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Alju01g1248 Pkinase 5.4e-74 CL0016