Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1230 ATGTCGCGATTACTGTGTAAGCGTTGGAGCAGGTTGTTTACATCATTCAGAACAGTAAATTGTTATGGGAAGAGACTTCAATTCTCAGCATTCGCCTTTTCCACTACCTCTGCGGAGCATGACAGTCCGAGTCGACCTAGTCCGCCTCCTATTCGTGTGGGTTTTACCGAGTCAGCTGGGCGTGGTATATTTGCCACTCGAGCAATCGGAGCCGGAGATCTCATCCATACCGCCAAACCCTTCCTGAGCCACCCTTCTCCCTCCGCTGTCCACTCTGTCTGTTATTTTTGCCTCAGAAAACTCCGAAATTCGACTGAACCGGAAGATGCAGGGGTATCACTTTGCAGCGAAGAATGCAAAGAACGTTCTAAGGAGTTTTATGATGTCGAGGTGAAAGCGAATTGGATGGCTTTTGATGATTATTGCCGGACCCATGGTTTGAAATATCCATTTATGGTGAAACGGTTGGCTTGCATGATCATATCAGGAGTTGCCAGTATAGACAGTCTTGACATACTTCAACCTGCCAGTTTGACTGCTGAGATGATATTAGAGTTGGAAGAGGGTTTTTCCTTGTTAAGGAATGCCTTCACAAAGACTCTTATCGCAGATGAAGATGTTGCCTTTCTAAGCAAGGAATGGTACATTAATGTTCTGGCCCGAATTCGTATTAATGCATTTCGGGTTGAACTGGCTGGAGGCTTGTACGAAGATCTGCTATCATCTGCAGTTGCGTCTGTAGAAGCCGAAGCTGCTGTTGGAAATGCTGTCTACATACTTCCATCATTCTACAATCATGACTGTGATCCTAATGCACACATTATATGGATAGATAATACGGATGCAAAATTGAAGGCCCTCCGTAACGTTAAGGAAGGCGAAGAACTAAGAATCTGCTACATTGATGCCAGTCTGGACCGTGATGCTCGGCAAGAACTTTTGCTTCAAGGTTTTGGTTTTCACTGCAATTGCAATAGATGCTTACAAGGCGACTAA 996 0.4498 MSRLLCKRWSRLFTSFRTVNCYGKRLQFSAFAFSTTSAEHDSPSRPSPPPIRVGFTESAGRGIFATRAIGAGDLIHTAKPFLSHPSPSAVHSVCYFCLRKLRNSTEPEDAGVSLCSEECKERSKEFYDVEVKANWMAFDDYCRTHGLKYPFMVKRLACMIISGVASIDSLDILQPASLTAEMILELEEGFSLLRNAFTKTLIADEDVAFLSKEWYINVLARIRINAFRVELAGGLYEDLLSSAVASVEAEAAVGNAVYILPSFYNHDCDPNAHIIWIDNTDAKLKALRNVKEGEELRICYIDASLDRDARQELLLQGFGFHCNCNRCLQGD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1230 331 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 47 329 - -
Alju01g1230 331 Gene3D SET domain 62 327 IPR046341 -
Alju01g1230 331 SUPERFAMILY SET domain 45 327 IPR046341 -
Alju01g1230 331 Gene3D - 93 144 - -
Alju01g1230 331 Pfam SET domain 60 300 IPR001214 GO:0005515
Alju01g1230 331 Coils Coil 277 297 - -
Alju01g1230 331 CDD SET_SMYD 254 327 - -
Alju01g1230 331 ProSiteProfiles SET domain profile. 49 301 IPR001214 GO:0005515
Alju01g1230 331 Gene3D - 145 226 - -
Alju01g1230 331 SMART set_7 49 307 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1230 Alju-ChrAlju01 9606861 9610024 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju01g1230 SET 3e-13 No_clan