Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1213 ATGGACAAGTCCGACAGAGAGACTCATGACTTCATGAACGTCGAGTCCTTCTCTCAGCTCCCTTTTATCCGTCCTCCTCCTCTCAAAGACAAGCCCCTTAAGCTTTTCGGCATTGAATTTCCCAACGGCGACTCTTCTTCCGCCCCCGAAGACGCCCACTCCTCCGACGCCACCAATAATAATACTTTTGACCTCGATTCCAAGGACGCCGCCGCCTCCGCCTCCGCCGACAATAATGTTGAAACCAGCCGCCGATTCGAATGCCATTACTGTTGTAGAAACTTCCCCACCTCTCAAGCCTTAGGTGGCCACCAAAACGCCCATAAACGTGAGCGTCAGCACGCCAAGCGAGCTCACCTTCAGTCCGCCATGGTCCACAATAGCTTCTCCGTCGACGCCGATGCCGCCGCTCATGTCTACGGCCTCATGAACTACCACCGCATGGGCTCCACCACCCCATACCCCTCGTGGCATAATAGTAACTCTGCCGGTGGAAGATTTTATGGAAGCCATGGTACGACGCCGTATCCTCATCTGCAACCCATCAACGGTAGCCCCTTAGCCTTGTGGCGGATCCCCGCCACCGTCCGAAACAACCCTACTACCACTTTCAATCGTGACCGTTCGTTGCACTTACAGCATCCGTTGCCCTTGCTCGCCGGCGACGAAATTAACGTCGGAGCTTCTCATCAGGTCGTTGGTTCCGCTTCGCAGAATCGCCTTGTTTATGACTCTAAACCCGGTGTTCACGACCATGTGAGTTTGGATCTTCACCTGTGA 780 0.5449 MDKSDRETHDFMNVESFSQLPFIRPPPLKDKPLKLFGIEFPNGDSSSAPEDAHSSDATNNNTFDLDSKDAAASASADNNVETSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVHNSFSVDADAAAHVYGLMNYHRMGSTTPYPSWHNSNSAGGRFYGSHGTTPYPHLQPINGSPLALWRIPATVRNNPTTTFNRDRSLHLQHPLPLLAGDEINVGASHQVVGSASQNRLVYDSKPGVHDHVSLDLHL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1213 259 PANTHER ZINC FINGER PROTEIN GIS 1 259 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Alju01g1213 259 Gene3D Classic Zinc Finger 64 138 - -
Alju01g1213 259 MobiDBLite consensus disorder prediction 1 65 - -
Alju01g1213 259 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 113 IPR013087 -
Alju01g1213 259 MobiDBLite consensus disorder prediction 47 65 - -
Alju01g1213 259 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Alju01g1213 259 SUPERFAMILY beta-beta-alpha zinc fingers 83 114 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1213 Alju-ChrAlju01 9477250 9478029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1213 1 259 C2H2 Transcription Factor Family AT3G58070 42.491 1.64e-51 167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1213 01 9477250 9478029 Alju03g2351 03 50298707 50299890 CCT
Alju01g1213 01 9477250 9478029 Alju01g1213 01 9477250 9478029 ECH