Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1204 ATGTTGTGCTGCGGAGGTACAGAGGAAGAGAGCAGTGGCCCGCCTGCAAACCAAAACCCTGCACTACCCAGAGGTGGTAATGCGTATGGAGAAGGGGGTGACAGAGGAGAGCCAAGAAGCAATGCAGCCAAGGCTGGTGCTCCCCAAAAAGTGTTGCCAATTGAGACACCCGCAATACCATTGGACGAGTTAAATAGGTTAACGGACAACTTTGGCCAAAACGCTTTGATTGGAGAAGGTTCCTACGGACGAGTCTTTTATGCCACGTTAAGCGACGGTCAGGATGCAGCCATCAAGAAGCTGGATACCGGTGGTAATTCTACCCCTGACGAAGACGCCGACTTTGCAGCTCAGTTATCTCTCGTTTCAAGACTGAAGCACGATCACTTTGTGTCGTTGATTGGATATTGTTTGGAGTCAAGTAACAGAATTTTGGTTTATCAGCATGCAAGTTTGGGTTCTTTGCACGACGTATTACATGGAAGGAAAGGTGTACAGGGGGCGGAACCAGGTCCAGCTCTGAGCTGGAACCAGAGAGCAAAGGTCGCACTTGGAGCAGCAAAAGGCCTCGAGTATCTTCATGAAAAGGTTCAACCTCCCATAGTCCATCGTGATATCAGATCCAGCAATGTCTTACTGTTCGGTGACTATGATGCCAAGATTGCGGATTTCAACTTGACCAACCAGGGTTGTGACACAGCAGCTCGCCTACATTCAACTAGGGTCTTGGGAACATTTGGCTATCATGCTCCAGAGTATGCCATGACAGGGCAGATAACCCAGAAAAGCGACGTTTACAGTTTCGGAGTAGTTCTCTTAGAACTCTTAACAGGAAGAAAACCAGTGGACCACACAATGCCCAAAGGCCAACAAAGTCTTGTGACTTGGGCAACTCCAAGGCTGAGCGAGGACAAAGTGAAACAGTGTGTGGATCCCAAACTCAACAATGAGTACCCACCAAAGGCAATTGCTAAGTTCGCGGCGGTTGCAGCATTGTGTGTTCAGTATGAGGCTGACTTCCGGCCCAACATGACCATTGTGGTGAAAGCTTTGCAGCCACTTCTGAATGCAAAACCAGCGGGCCCAGAACCTAGTGCTTAA 1101 0.4905 MLCCGGTEEESSGPPANQNPALPRGGNAYGEGGDRGEPRSNAAKAGAPQKVLPIETPAIPLDELNRLTDNFGQNALIGEGSYGRVFYATLSDGQDAAIKKLDTGGNSTPDEDADFAAQLSLVSRLKHDHFVSLIGYCLESSNRILVYQHASLGSLHDVLHGRKGVQGAEPGPALSWNQRAKVALGAAKGLEYLHEKVQPPIVHRDIRSSNVLLFGDYDAKIADFNLTNQGCDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKFAAVAALCVQYEADFRPNMTIVVKALQPLLNAKPAGPEPSA 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1204 366 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Alju01g1204 366 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 2 359 - -
Alju01g1204 366 MobiDBLite consensus disorder prediction 1 48 - -
Alju01g1204 366 PIRSF ILK 34 359 - -
Alju01g1204 366 SMART tyrkin_6 71 351 IPR020635 GO:0004713|GO:0006468
Alju01g1204 366 ProSiteProfiles Protein kinase domain profile. 71 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1204 366 SUPERFAMILY Protein kinase-like (PK-like) 52 351 IPR011009 -
Alju01g1204 366 ProSitePatterns Tyrosine protein kinases specific active-site signature. 201 213 IPR008266 GO:0004672|GO:0006468
Alju01g1204 366 FunFam Pti1 kinase-like protein 47 149 - -
Alju01g1204 366 FunFam PTI1-like tyrosine-protein kinase 3 151 360 - -
Alju01g1204 366 Gene3D Transferase(Phosphotransferase) domain 1 151 360 - -
Alju01g1204 366 Pfam Protein tyrosine and serine/threonine kinase 75 351 IPR001245 GO:0004672|GO:0006468
Alju01g1204 366 Gene3D Phosphorylase Kinase; domain 1 38 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1204 Alju-ChrAlju01 9369912 9371686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1204 35 365 Receptor kinase-like Gene Family AT3G58690 43.284 8.69e-90 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Alju01g1204 PK_Tyr_Ser-Thr 6.5e-43 CL0016