Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1195 ATGAACTTTTGTTGGATGGCGAAGCCTCAACTGTTAGCAGTCATCTTCATCAGAATCCTCGTCGGCCATATCCAAGTAGTCGACTGCTTTACTTTCGATTTCCCCCTCTTCAAGCCAGAAGATCAAAATCGGTTAATACTGAGTGATTTTTCGCGCATATTCCGAGATGCCATCCAAGTTACCCCTGATGCTTACGGTGAAGACTTGAGGAACAGGTCCGGGAGGGCCTTCTACAATAAGGCATACAGGGTTTGGAGCAAGGAGAAGAACCAAACGGCGTCGTTTAATACTTCCTTCATCCTCAATATCAGCCCCAATACTCCTTCAAACCCCGGTGCCGGCGAAGGATTGGCCTTCGTACTAGCCGCGGACACAAGTCTCCCTCCCAACAGTTATGGAAGATGGCTTGGCGTTGTGAATTCCTCCACAAATGGCACTTCTGATGCAGCCATATTGGCTGTGGAGTTTGATACCATAAACAACTCCCCAGATGATGGCCCTAACGGTCATGTTGGCGTGAACGTGAACAGTATCGACTCCATCAAACAGGTACCATTACTTCCCTTGGGGATCAATATTTCATCGGGCGTCAACGTGTCAGTGAGAATTCAGTATGATAACGATGTGATCTCTGTCTTCGGTTACATGATGAATGGAACCAAATCACAAGAGGACCTCTTGTTGCAATCTCCACCCTTGAATCTCACCTCATATCTACCAGAGAAGGTATATCTGGGGTTCTCTGCATCCACGAGTAATTTCAATGAGTTGAACTGCATTAGATCGTGGGATTTCAACGGTGAAGATATCGGAAACGGAAATCAAGATGTACTGTGGGTTTGGATCACAGTTCCAACGGTAGTGGTTATTATCGCCGGTGCGATGACATTTTTCTTGATATGGCGGTGGAGAAGAAGAGGGGAAATAACAGAGGATGCGTATCCGAGGATAGAAGACCAGATCAAGTGTTCCTCAATGGCTCCGAAGAAATTCAGGCTGAGGGAAATCAAAAGGGCGACGGCCAATTTCAACGACCATAACAAACTCGGGGAAGGTGGTTTCGGAAAAGTGTACAAGGGAATGCTGGGAAACAGAGAGATCGCAGTGAAGAGAGTGTCCAAGGATTCACGTCAAGGGAAGCAAGAATTCATAGCAGAAGTCACAACGATAGGTAGCCTTCACCAAAAGAATCTGGTTAAACTAATAGGTTGGTGCTACGAGAGAAACGAACTCCTCCTCGTGTACGAGTTCATGCCCAATGGAAGCCTAGACAAGTACCTATTCGAGAGCTCAGATGGATCACCATATCAAAACCTTCACTGGGAAACCAGATACAATGTGATACACGGTGTGGCAGAAGCACTTGACTATCTCCACAACGGGTGCGACAAGAAGGTGATTCACAGGGACATCAAGGCAAGCAATATCATGTTGGACTCTGACTTCAACGCCAAGCTGGGAGATTTCGGACTTGCTCGTACCATTCAGAAAAGGAACGAGACTCACCATTCCACTAAAGGAATAGCAGGGACTCCGGGTTACATGGCGCCGGAGACGTTTCTGACGGGGAGGGCGACGGTGGAAACTGACGTGTACGCGTTCGGGGTTCTGATAATGGAAGTGGTATGTGGGAAGAGGCCAGGGAACGTGGCTGTTGAGAACGATTACAAGAAAAGTGTGGTGTATTGGGTGTGGGAGATGTATGGGAACGGAAAAACTTTAGATGGAGTTGATAAAAGAATAAAGAAGGAGAATGAGGGAGATGAGGAGCGAGTGGAGAGAGTGATAGTGCTAGGCCTTGCTTGTTGCCATCCCAATCCTCACAAAAGGCCATCCATGAAGACGGTGTTGCAGGTTCTGACCGGCGAGGTGGCTCCACCTGATGTCCCAAGGGAACGGCCGGCTTTTGTGTGGCCGGCAGCTCCCCCTTCCTTCAACGTCAATGATAGTTCCGTTAATTCAGCCCAACTCACTCCTCCCTTCACTGATCTCACCGGCAGATGA 2004 0.4815 MNFCWMAKPQLLAVIFIRILVGHIQVVDCFTFDFPLFKPEDQNRLILSDFSRIFRDAIQVTPDAYGEDLRNRSGRAFYNKAYRVWSKEKNQTASFNTSFILNISPNTPSNPGAGEGLAFVLAADTSLPPNSYGRWLGVVNSSTNGTSDAAILAVEFDTINNSPDDGPNGHVGVNVNSIDSIKQVPLLPLGINISSGVNVSVRIQYDNDVISVFGYMMNGTKSQEDLLLQSPPLNLTSYLPEKVYLGFSASTSNFNELNCIRSWDFNGEDIGNGNQDVLWVWITVPTVVVIIAGAMTFFLIWRWRRRGEITEDAYPRIEDQIKCSSMAPKKFRLREIKRATANFNDHNKLGEGGFGKVYKGMLGNREIAVKRVSKDSRQGKQEFIAEVTTIGSLHQKNLVKLIGWCYERNELLLVYEFMPNGSLDKYLFESSDGSPYQNLHWETRYNVIHGVAEALDYLHNGCDKKVIHRDIKASNIMLDSDFNAKLGDFGLARTIQKRNETHHSTKGIAGTPGYMAPETFLTGRATVETDVYAFGVLIMEVVCGKRPGNVAVENDYKKSVVYWVWEMYGNGKTLDGVDKRIKKENEGDEERVERVIVLGLACCHPNPHKRPSMKTVLQVLTGEVAPPDVPRERPAFVWPAAPPSFNVNDSSVNSAQLTPPFTDLTGR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1195 667 Gene3D Phosphorylase Kinase; domain 1 328 417 - -
Alju01g1195 667 Gene3D Transferase(Phosphotransferase) domain 1 418 625 - -
Alju01g1195 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Alju01g1195 667 Pfam Protein kinase domain 344 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1195 667 ProSitePatterns Protein kinases ATP-binding region signature. 349 370 IPR017441 GO:0005524
Alju01g1195 667 ProSitePatterns Legume lectins beta-chain signature. 152 158 IPR019825 -
Alju01g1195 667 SMART serkin_6 343 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g1195 667 CDD lectin_legume_LecRK_Arcelin_ConA 30 266 IPR001220 GO:0030246
Alju01g1195 667 Pfam Legume lectin domain 31 269 IPR001220 GO:0030246
Alju01g1195 667 Gene3D - 27 275 - -
Alju01g1195 667 FunFam probable L-type lectin-domain containing receptor kinase S.5 418 626 - -
Alju01g1195 667 FunFam Probable L-type lectin-domain containing receptor kinase S.5 328 417 - -
Alju01g1195 667 PANTHER - 63 627 - -
Alju01g1195 667 FunFam Probable L-type lectin-domain containing receptor kinase S.5 29 274 - -
Alju01g1195 667 ProSitePatterns Legume lectins alpha-chain signature. 239 248 IPR000985 -
Alju01g1195 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 266 IPR013320 -
Alju01g1195 667 CDD STKc_IRAK 349 622 - -
Alju01g1195 667 SUPERFAMILY Protein kinase-like (PK-like) 325 620 IPR011009 -
Alju01g1195 667 ProSiteProfiles Protein kinase domain profile. 343 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1195 Alju-ChrAlju01 9278453 9280456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1195 73 636 Receptor kinase-like Gene Family AT5G55830 37.686 3.05e-121 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju01g1195 Pkinase 4.1e-50 CL0016