Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1190 ATGTTTTCGTGGCTGGCAAATATGGTTTCTACGTGTTTAAGACCAATAAGGCGGTATGCCCGTATGAACAGGGATGACATCGATGATTCTTCCTCGTCTGAAGACGCTCTCCTCTGGTGCAAGGACCTTGAAAAGCACTCGTGCGGCGAATTCTCTTTTGCTGTAGTTCAGGCCAATGAAGTAATTGAGGATCAAAGCCAGGTTGTGACGGGCCCAGACGCTGTGTTCGTTGGGATATACGATGGCCATGGCGGTCCCGAAGCGTCCCGGTTCGTCTGCGACCACCTCTTCCAACATCTAATGGGGATTGCTCAAGCAAATGGTACTATATCCGAAGATATGCTCAGGGATGCTGTTTCTGCTACTGAAGATGGATTTCTGAATCTTGTTCGAAGAACATTTGGTATAAAACCATTGATGGCAGCAACAGGTTCCTGTTGTCTGGTGGGCCTTATTTGGAAAGGGACATTATATGTTGCAAATCTTGGAGATTCACGTGCTGTAATTGGCTCTGTGCACGGGTCTAACAAGATCGTTGCTGAGCAGTTGACTAGAGAGCACAATGCAAGCAGAGAGGAGGTTAGACGAGAGCTCAGGACTTTGCATCCTGAAGACTCACAAATTGTAGTTATGAAGCACGGAACATGGCGTGTTAAAGGCATCATTCAGGTATCCAGATCTATAGGTGATGCATATTTGAAGGGACCAGAGTTCTCTCTTGATTCTTCCTTCCCACGGTTCCATCTGCCAGATCCTATCCGTCAACCTGTGCTTTCGGCAGAACCATCTATATGTTCCAGAATGATACAGCCAAATGATAAATTTCTTATATTTGCATCTGATGGCCTCTGGGAACACATGACAAATCAGGAAGCTGCTGAGATTATTCATAACAACCCACGAACTGGGATTGCAAGAAGACTGGCGATGACTGCCCTGAATGAAGCGGCTAGGAAGAGGGAAATGAGATTTAAAGACATGCAGAAGGTTGGGAAAGGGATCAGGAGATTTTTTCATGATGATATCTCTGTTGTTGTGATCTTCATAGACCATGAGTTGCACGGAAAGAAGATAGCTGTACCAGAGTTATCCATTAGAGGTTTCGCCGACAAGATTGGACCGTCAAATCTTAAAATTATCATGGAGTAA 1149 0.4526 MFSWLANMVSTCLRPIRRYARMNRDDIDDSSSSEDALLWCKDLEKHSCGEFSFAVVQANEVIEDQSQVVTGPDAVFVGIYDGHGGPEASRFVCDHLFQHLMGIAQANGTISEDMLRDAVSATEDGFLNLVRRTFGIKPLMAATGSCCLVGLIWKGTLYVANLGDSRAVIGSVHGSNKIVAEQLTREHNASREEVRRELRTLHPEDSQIVVMKHGTWRVKGIIQVSRSIGDAYLKGPEFSLDSSFPRFHLPDPIRQPVLSAEPSICSRMIQPNDKFLIFASDGLWEHMTNQEAAEIIHNNPRTGIARRLAMTALNEAARKREMRFKDMQKVGKGIRRFFHDDISVVVIFIDHELHGKKIAVPELSIRGFADKIGPSNLKIIME 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1190 382 FunFam Probable protein phosphatase 2C 42 41 357 - -
Alju01g1190 382 Coils Coil 180 200 - -
Alju01g1190 382 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Alju01g1190 382 SUPERFAMILY PP2C-like 56 350 IPR036457 -
Alju01g1190 382 Pfam Protein phosphatase 2C 73 316 IPR001932 -
Alju01g1190 382 ProSiteProfiles PPM-type phosphatase domain profile. 50 349 IPR001932 -
Alju01g1190 382 SMART PP2C_4 44 347 IPR001932 -
Alju01g1190 382 Gene3D - 21 357 IPR036457 -
Alju01g1190 382 CDD PP2Cc 51 349 IPR001932 -
Alju01g1190 382 PANTHER PROTEIN PHOSPHATASE 32 347 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1190 Alju-ChrAlju01 9247971 9250566 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1190 1 381 PP2C-type Phosphatase Gene Family AT5G06750 65.816 0.0 522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1190 01 9247971 9250566 Alju03g2329 03 50120926 50126445 CCT
Alju01g1190 01 9247971 9250566 Alju01g1190 01 9247971 9250566 ECH