Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju01g1175 | ATGTGTCTCTCCGGCCTACTGGGCGCCGGGACGTTCACCGCCGGAGACATGAGGGAAGGTGACGAGGCGAGCAGAAACGGAACTCAAAGGGAAGAACAAGATGAAGACTACATGGGGGATCTCTCTCAGTTTCTTCCTTCAGAAGCGTTTGATCCTTCTGAATCGTTGTCCAGAAAGAACTCTAACAAGAAAACCACAACGGTCGACTCTACCAAAAAGCAATTGAAAAATCTCAGCTGGCAAGAACGAAGAAAACTTGAAAGACAAAAAAAACAAGAAGAAGAAGATGAGCAGACATTAGCAAAAGTGGAAGCTCCGATCCCACAATCAAACATTGGATTTAAGCTGCTCAAACAAATGGGTTATACACCAGGCTCTGCCCTTGGAAAGGAGGGTTCAGGCAGGGCTGAACCTGTAGGAATTGATATTCGACGGTCACGAGCTGGTATAGGACTAGATGATCCCCACAAGGAGAAGAGGAAAAGGGAGGAGATGGAGATGGAGAGGAAAAAGAGAAAAGAAGAGACACTGATGGAAGAATTTGGGTTTAGGCAAAAGTCACAGTGGCAGAGTAGGAGAATTATAAGCAATTTCAAGAAGGCAAAGGCTGCTCTTGACCAGTTAGAGAACAGGGAAGTTGTACCTCCGAAGAATGATGAGGAGGAGGAGGGTGATGATGATGAAGAGGATGAGGAAGAAATAACAGAAGAGGATTTACAGGATGTTCTGATGAAACTAAGGGATGAGCATCAGTATTGCCTCTTCTGTGGGTGTAAGTATGAATCAAAGGATGCTCTTTTGGCTAACTGCCCTGGGACCAATGAAGATGACCACTAA | 837 | 0.454 | MCLSGLLGAGTFTAGDMREGDEASRNGTQREEQDEDYMGDLSQFLPSEAFDPSESLSRKNSNKKTTTVDSTKKQLKNLSWQERRKLERQKKQEEEDEQTLAKVEAPIPQSNIGFKLLKQMGYTPGSALGKEGSGRAEPVGIDIRRSRAGIGLDDPHKEKRKREEMEMERKKRKEETLMEEFGFRQKSQWQSRRIISNFKKAKAALDQLENREVVPPKNDEEEEGDDDEEDEEEITEEDLQDVLMKLRDEHQYCLFCGCKYESKDALLANCPGTNEDDH | 278 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju01g1175 | 278 | PANTHER | UNCHARACTERIZED | 32 | 278 | IPR039249 | - | |
| Alju01g1175 | 278 | MobiDBLite | consensus disorder prediction | 65 | 101 | - | - | |
| Alju01g1175 | 278 | ProSiteProfiles | G-patch domain profile. | 109 | 155 | IPR000467 | GO:0003676 | |
| Alju01g1175 | 278 | MobiDBLite | consensus disorder prediction | 137 | 173 | - | - | |
| Alju01g1175 | 278 | MobiDBLite | consensus disorder prediction | 18 | 37 | - | - | |
| Alju01g1175 | 278 | Coils | Coil | 191 | 211 | - | - | |
| Alju01g1175 | 278 | Pfam | G-patch domain | 109 | 152 | IPR000467 | GO:0003676 | |
| Alju01g1175 | 278 | Coils | Coil | 77 | 103 | - | - | |
| Alju01g1175 | 278 | SMART | DUF4187_2 | 221 | 278 | IPR025239 | - | |
| Alju01g1175 | 278 | SMART | G-patch_5 | 107 | 153 | IPR000467 | GO:0003676 | |
| Alju01g1175 | 278 | Coils | Coil | 160 | 180 | - | - | |
| Alju01g1175 | 278 | MobiDBLite | consensus disorder prediction | 126 | 173 | - | - | |
| Alju01g1175 | 278 | Pfam | Domain of unknown function (DUF4187) | 226 | 278 | IPR025239 | - | |
| Alju01g1175 | 278 | MobiDBLite | consensus disorder prediction | 48 | 64 | - | - | |
| Alju01g1175 | 278 | MobiDBLite | consensus disorder prediction | 219 | 238 | - | - | |
| Alju01g1175 | 278 | MobiDBLite | consensus disorder prediction | 205 | 240 | - | - | |
| Alju01g1175 | 278 | Coils | Coil | 217 | 237 | - | - | |
| Alju01g1175 | 278 | MobiDBLite | consensus disorder prediction | 1 | 104 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju01g1175 | 101 | 151 | C2H2 Transcription Factor Family | AT5G26610 | 43.137 | 1.86e-06 | 46.6 |