Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1169 ATGGCTTACAGTGGTAACAAGAGCAACAACGGAACAAGCAGTGAGATGGAACCACTCCCACTCCCACCACCTCCACTACTTCACCATCAAATTCATCAAGACCACCGAATCTCTTTCGGAATGATGCCATCTTCTTCCTCCTCCAATTTTCTAAGCAAGGATTCCGGAGCTTACGATTTAGGTGACTTGGATCAAGCGCTTCTTTTGTATCTCGACGGACAAGCCGACCCTTCCTCCATTAATGTTCAAGACCAAAGACAGAACTCGTCATCGTCGGGAATGAGGCCTCCCACTCTCAACATTTTTCCCTCTCAGCCTATGCACGTCGACCCGCCTTCCTCCAGCAAGGCTGGCATGGAATTAGTTTCTCCTCAAAGCAGTGGTTCCAAGAGACCATCGGAGCCTTCCATGAGGTTGTCTCACTCGCAAAACGAAGCAGCCGCCGCCGCCGCCCCTAATCAATCAGCCAAAGCTGTCAAGCGAGAGAGCACTCGTAAGGGCCCAACCTCAAGTTCTGAACAGGAGGGGCCTAAAACACCTGATCCTAAGACACTCAGAAGACTAGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGAAAAAAGGCATATGTGCAGCAGCTAGAGTCAAGTAGGATCAGGCTGAATCAGCTGGAACAAGAATTGCAGCGTGCTAGAGCTCAAGGCATATTCTTTGGAGGATCGGGTGCAGTTTTGGGAGGAGAGCAAGGCCTTCCCGTAGCTATGAGTACCACAAGCCCAGATGCTGCAATGTTTGACGTGGAATACGGGAGATGGGTGGAGGAGCACCACCGGCTAGTGTGTGAGCTGAGGGCGGCGGTTCAAGAGCACCTGCCGGAGAACGAGCTGAGGCTATTTGTGGACAACTGTCTAGCTCATTATGACCAAGTTATGAACCTCAAGAGCATAGTGACTAAAACGGACGTCTTCCACCTTGTTTCCGGCATGTGGAAGACTCCCGCCGAGCGTTGCTTCATGTGGATCGGTGGATTCAGGCCCTCTGAACTCATTAAGATAATTCTAAATCAAATAGAGCCGCTGACGGAGCAACAAATACTTGGGATCTGTGGGTTGCAACAATCCACACAGGAGGCAGAAGATGCTCTCTCACAGGGGCTGGAAGCTCTGAATCAATCTCTCTCGGAAACCATAACGTCAGACTCATTGAGCTCTACACCTAATATGGCCAACTACATGGGACAAATGGCCCTGGCCATCAACAAGCTCTCCACCCTCGAAGGTTTCGTCCGACAGGCGGATAGTCTTCGGCACCAAACAATTCACCGTCTGCATCAGATTCTAACGACGCGTCAAGCGGCGAGGTGTTTGCTGGCCATGGCGGAGTACTCTTATCGTCTGAGAGCCCTCAGCTCTCTGTGGGTGGCTCGCCCCCGCCAGGATTAA 1428 0.514 MAYSGNKSNNGTSSEMEPLPLPPPPLLHHQIHQDHRISFGMMPSSSSSNFLSKDSGAYDLGDLDQALLLYLDGQADPSSINVQDQRQNSSSSGMRPPTLNIFPSQPMHVDPPSSSKAGMELVSPQSSGSKRPSEPSMRLSHSQNEAAAAAAPNQSAKAVKRESTRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQLEQELQRARAQGIFFGGSGAVLGGEQGLPVAMSTTSPDAAMFDVEYGRWVEEHHRLVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKSIVTKTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIILNQIEPLTEQQILGICGLQQSTQEAEDALSQGLEALNQSLSETITSDSLSSTPNMANYMGQMALAINKLSTLEGFVRQADSLRHQTIHRLHQILTTRQAARCLLAMAEYSYRLRALSSLWVARPRQD 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1169 475 ProSiteProfiles DOG1 domain profile. 257 471 IPR025422 GO:0006351|GO:0043565
Alju01g1169 475 CDD bZIP_HBP1b-like 183 235 - -
Alju01g1169 475 MobiDBLite consensus disorder prediction 78 186 - -
Alju01g1169 475 Gene3D - 182 231 - -
Alju01g1169 475 PANTHER TRANSCRIPTION FACTOR TGA9 91 474 - -
Alju01g1169 475 MobiDBLite consensus disorder prediction 78 99 - -
Alju01g1169 475 Coils Coil 202 229 - -
Alju01g1169 475 SMART brlzneu 179 253 IPR004827 GO:0003700|GO:0006355
Alju01g1169 475 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 186 201 IPR004827 GO:0003700|GO:0006355
Alju01g1169 475 FunFam BZIP family transcription factor 182 231 - -
Alju01g1169 475 MobiDBLite consensus disorder prediction 118 150 - -
Alju01g1169 475 MobiDBLite consensus disorder prediction 1 16 - -
Alju01g1169 475 Pfam Seed dormancy control 275 349 IPR025422 GO:0006351|GO:0043565
Alju01g1169 475 SUPERFAMILY Leucine zipper domain 183 225 IPR046347 GO:0003700|GO:0006355
Alju01g1169 475 MobiDBLite consensus disorder prediction 1 28 - -
Alju01g1169 475 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 181 225 IPR004827 GO:0003700|GO:0006355
Alju01g1169 475 Pfam bZIP transcription factor 183 216 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1169 Alju-ChrAlju01 9036217 9042139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1169 49 475 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.556 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju01g1169 DOG1 3.8e-31 No_clan