LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju01g1158	ATGGAAATGCAACTTCCTCTCCATATAGCTTCATTTCTCCTCTTCTTCTTAGCTTCCTCTACCTCCTCATTGAATTCCGATGGTCTCTCTCTACTCGCTCTCAAAGCCGCCATTGAGTCTGACCCTTCCGGAGTTCTCAACTCGTGGTCCGACTCTGACTCCACCCCATGTCGCTGGGCTGGTGTCGCCTGTGCCCATGACCGAGTCACCCAGCTGGTTCTGCCCAACAAAGGCCTTACCGGTTACATCCCATCTGAACTCGGGTTGCTCGACTCGCTCAGGCAACTCAGTCTTTCGCACAATAACTTCTCCAACGCCATTCCTTCCCGTCTGTTCAACGCGACCGGCCTCGTCGTTTTGGACCTCTCTCATAATCTCCTCTCTGGACCCATCCCAACTGAGATCAGGTTTCTCAAATCACTGAGACATTTGGATTTCTCCTCAAATTCCCTTAATGGCTCTCTCCCTGAAGCTCTATCCGAGCTCACTAACCTCGTCGGAAACTTGAATCTATCTTACAATCACTTCACTGGTGGGATCCCGGAGTCTTTCGGCCGACTCCCTGTTATTGTCAGTTTGGATCTCCAGAACAACAATCTGACAGGAAAAATCCCTCAAGTAGGTTCGTTGCTAAACCAGGGTCCTACAGCTTTCTCCGGTAACCCCGGGCTCTGTGGGTTCCCTTTGCAGAATGCCTGCCCAGAAGCTCAGAATCCGGAGAATTACCCAAGCACCGAAGACCCTGAGAACCCAAAAACCGTTCACCCTGGGTTTCCAACGGGATTTCAAGAAGCGAAGACGAAAGAGCGAGGTCGTTCCGTCATTGTCCCTGTAATTTTCGGCGTCTCATTAGTAGCAGGGGCCATTTCGTTGTCAGTGTGGCTGTTGCGCAGACGACGGACGGTTGATTTGGGCAAGTTAGGGAAGCAAAAATTAGACAATGAGGCCGACGAAGAAGGAGGTGAAGGGCAAAAGGGTAAGTTCGTGATCGTAGATGAAGGGTTCAGTCTGGAACTAGAGGATTTATTAAGGGCATCCGCATATGTGGTGGGGAAGAGTAAGAGTGGTATAGTATATAAGGTGGTGGCTGTAGAGAAAGGGTCGGGCCCGGCGGCGACGGTGGTGGCCGTCCGGCGGTTGAGTGAGGGTGATGCCACGTGGAAGCTCAAGGAGTTCGAGGCTGAAGTGGAGACCATTGGAAGGGTCAACCACCCTAACATCGTCCGCTTAAGAGCATATTACTATGCAAGTGATGAAAAACTAATCATCACTGATTTCATCCGCAATGGAAGCTTGCACACTGCACTTCATGGTGGACCTTCCAATCCTTTGCCGCCATTAACATGGGCAGCAAGGTTAAAGATTGCTCAAGGAGCTGCAAGGGGTTTAATGTACATACACGAGTTCAGTGGTCGAAAATACGTGCATGGCAACCTTAAATCAACAAAAATCTTGCTGGACGATGAACTCAATCCTTTCATATCTGATTTTGGACTTGCTCGTCTCATGTCGAGTTGCTCTAAGTCCACAACAATGGCACCGAAGCGACAGAACTCAAAGCAGTCAATTGCAACCTCTGCAATGGCAGCTTCCCAAAACAACCACTTGGCACCAGAGGTGCGCATGAGCGGAGGCAAATATACTCAGAAATGTGATGTGTATTCTTTTGGGATAGTCCTGTTAGAACTACTAACTGGACGGAGGCCAGATTCAGGAGCAGATAATGAGGGTGAGGTACTGGAGAGTTTTGTGAGGCAAGCATTCAGGGAAGAGAAACCCTTGTGCGAGATTATAGACCCAGCACTTCTGTCTGAAGTGTATGCTAAAAAGCAAGTAGTAGCAGCATTTCATCTTGCACTGAGCTGCATAGAACATGACGCAGAGTTGCGAGCGAGAATGAGAACCGTGTCGGAGAGCCTTGATCGGATCAAGGCACCATGA	1941	0.4956	MEMQLPLHIASFLLFFLASSTSSLNSDGLSLLALKAAIESDPSGVLNSWSDSDSTPCRWAGVACAHDRVTQLVLPNKGLTGYIPSELGLLDSLRQLSLSHNNFSNAIPSRLFNATGLVVLDLSHNLLSGPIPTEIRFLKSLRHLDFSSNSLNGSLPEALSELTNLVGNLNLSYNHFTGGIPESFGRLPVIVSLDLQNNNLTGKIPQVGSLLNQGPTAFSGNPGLCGFPLQNACPEAQNPENYPSTEDPENPKTVHPGFPTGFQEAKTKERGRSVIVPVIFGVSLVAGAISLSVWLLRRRRTVDLGKLGKQKLDNEADEEGGEGQKGKFVIVDEGFSLELEDLLRASAYVVGKSKSGIVYKVVAVEKGSGPAATVVAVRRLSEGDATWKLKEFEAEVETIGRVNHPNIVRLRAYYYASDEKLIITDFIRNGSLHTALHGGPSNPLPPLTWAARLKIAQGAARGLMYIHEFSGRKYVHGNLKSTKILLDDELNPFISDFGLARLMSSCSKSTTMAPKRQNSKQSIATSAMAASQNNHLAPEVRMSGGKYTQKCDVYSFGIVLLELLTGRRPDSGADNEGEVLESFVRQAFREEKPLCEIIDPALLSEVYAKKQVVAAFHLALSCIEHDAELRARMRTVSESLDRIKAP	646

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju01g1158	646	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	13	644	IPR046959	-
	Alju01g1158	646	Pfam	Protein tyrosine and serine/threonine kinase	350	593	IPR001245	GO:0004672\|GO:0006468
	Alju01g1158	646	SMART	LRR_typ_2	90	114	IPR003591	-
	Alju01g1158	646	SMART	LRR_typ_2	138	162	IPR003591	-
	Alju01g1158	646	SUPERFAMILY	Protein kinase-like (PK-like)	349	640	IPR011009	-
	Alju01g1158	646	FunFam	Leucine-rich repeat receptor-like kinase	29	140	-	-
	Alju01g1158	646	Gene3D	Transferase(Phosphotransferase) domain 1	427	646	-	-
	Alju01g1158	646	Pfam	Leucine rich repeat N-terminal domain	25	64	IPR013210	-
	Alju01g1158	646	ProSiteProfiles	Protein kinase domain profile.	344	646	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju01g1158	646	Gene3D	Ribonuclease Inhibitor	139	234	IPR032675	-
	Alju01g1158	646	Pfam	Leucine rich repeat	92	151	IPR001611	GO:0005515
	Alju01g1158	646	MobiDBLite	consensus disorder prediction	235	256	-	-
	Alju01g1158	646	FunFam	Leucine-rich repeat receptor-like protein kinase	141	235	-	-
	Alju01g1158	646	Gene3D	Ribonuclease Inhibitor	29	138	IPR032675	-
	Alju01g1158	646	Gene3D	Phosphorylase Kinase; domain 1	329	426	-	-
	Alju01g1158	646	SUPERFAMILY	L domain-like	26	230	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju01g1158	Alju-ChrAlju01	8973467	8976354	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju01g1158	24	645	Receptor kinase-like Gene Family	AT3G57830	61.371	0.0	738

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Alju01g1158		PK_Tyr_Ser-Thr	8.3e-31	CL0016