Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1155 ATGGAGCAAACTACAGGAGGTTTCACTGGATTTAGTCTCACTGCCGGTGAACGCGATCAGGCCGCGCTTGAATCCTTTCAATTCAACGAGGAAATCGAGCGAATCATAGCCCCAGCCCCAGCCCCAGAAAATGTCAGCTCCTTCACTGCACTTCTCGAATTACCCCCAGCGCAAGCCAAGGAAATCCTCCACTCGCCCAACTGTGACGAAGCCGCCGCCGCCGCGCTGGTCCCCGCCTACGGGGAACAATCCTTCTGCCACATCAAAGATCAGAGACCCCACGTATTTCACTCTTTCAGTGGCACTTTAACTCTCCCTTCTAACACTGCTTTGGTCGAACGCGCTGCCAAGTTTTCAGTGCTTGCCGAAGAGAACTCGTCGCCGGAGGAACCTAACTTGGCTCCACTTAGTTCAGGAGCAAATTTGAACAGAGTAAAGCATGAACCCCCGGAAACCGATTCAAATCCTAAGCCAACCTCTGTTATCGCTTCTAACCCCTCGATTGAGTACAAGAATGAGAGGGCCACGAAGAGGAAGGAACGAGAGAAGAAGGATAAAGAGTCCTCGAAGAAAAGTAAAAGCGGCGCCGACGAAACATCCGGAGGCGGAGATAAACTTCCATACGTTCATGTTCGAGCTCGTCGAGGGACAGCTACAGACAGCCATAGCTTAGCAGAAAGGGCCAGGAGAGAGAAAATCAATGCTCGCATGAAGCTTTTACAAGAGCTGGTCCCCGGCTGCAATAAGATTTCAGGAACGGCATTAGTTCTGGATGAAATCATCAACCATGTGCAATCTCTTCAACGCCAAGTGGAGTTCTTGTCAATGAAACTAGCAGCAGTTAACCCAAGACTTGATTTCGACCTTGACAGCATATTGGCTACCGAAGGTGCATCTCGAGTGGACTGCAACTTTCCCGCCATGGTTACGCCTCCGGTGTGGCAGGAAGTTGCAGTCAATGGAAACAGGCAGCAATATCAACAACAGTGGCAATTCGATGCACTTAACCAACCAATTTGGGGGAGGGAGGAAGAGAACCGTAATTTCATGACCCCAGAAAACTCTCTCTTGAGCTATGACTCGTTGGCAAATTCAGGTACGTCAGATTTAAACTACTACTGCATATGCCTCCTCCCGGAAGACAAGTTCCACTCTACTTGTTTTAAACTGGAGTCGGTCACGGTTCTGGCTCTCATTGGCCTTGGATTCATCAAATCATTTGAAGATGGAGCTGTGAAGGAAGCAGGAGCCGAGTCGGGTGGCAACCTGGATTTTCCTCGACCACAGAGGAGTAAGAATCGGCCTCACGGAAAAGTTATCGAACCTTTTACTACATGGGATACATGCATTCACGAGAGTTGCGGAGTGGACATGGTTGATAACTACACAAGCATTCTTTGGCTTTTTGAAGGAGGTTTCAAACTAAACTTAAACTTACCTAAAGCGAATGAGCCATATATACATTTTGAGCATTACAAAACCAAGAAGCGTCACCAGTATTCTTTATTAATTAGTGGGGTTCTTGAGGCTTGTCGTGAGCGAAACTCCAGTCGATATGCTCGATGGAATCGAGACCTTTAA 1581 0.482 MEQTTGGFTGFSLTAGERDQAALESFQFNEEIERIIAPAPAPENVSSFTALLELPPAQAKEILHSPNCDEAAAAALVPAYGEQSFCHIKDQRPHVFHSFSGTLTLPSNTALVERAAKFSVLAEENSSPEEPNLAPLSSGANLNRVKHEPPETDSNPKPTSVIASNPSIEYKNERATKRKEREKKDKESSKKSKSGADETSGGGDKLPYVHVRARRGTATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMKLAAVNPRLDFDLDSILATEGASRVDCNFPAMVTPPVWQEVAVNGNRQQYQQQWQFDALNQPIWGREEENRNFMTPENSLLSYDSLANSGTSDLNYYCICLLPEDKFHSTCFKLESVTVLALIGLGFIKSFEDGAVKEAGAESGGNLDFPRPQRSKNRPHGKVIEPFTTWDTCIHESCGVDMVDNYTSILWLFEGGFKLNLNLPKANEPYIHFEHYKTKKRHQYSLLISGVLEACRERNSSRYARWNRDL 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1155 526 MobiDBLite consensus disorder prediction 171 198 - -
Alju01g1155 526 MobiDBLite consensus disorder prediction 154 170 - -
Alju01g1155 526 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 217 267 IPR011598 GO:0046983
Alju01g1155 526 FunFam transcription factor bHLH48-like isoform X1 214 286 - -
Alju01g1155 526 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 215 285 IPR036638 GO:0046983
Alju01g1155 526 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 135 359 IPR024097 GO:0006355
Alju01g1155 526 MobiDBLite consensus disorder prediction 123 207 - -
Alju01g1155 526 SMART finulus 223 273 IPR011598 GO:0046983
Alju01g1155 526 MobiDBLite consensus disorder prediction 417 438 - -
Alju01g1155 526 Coils Coil 172 192 - -
Alju01g1155 526 Coils Coil 257 277 - -
Alju01g1155 526 CDD bHLH_AtBPE_like 207 292 - -
Alju01g1155 526 Gene3D - 214 287 IPR036638 GO:0046983
Alju01g1155 526 Pfam Helix-loop-helix DNA-binding domain 221 268 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1155 Alju-ChrAlju01 8951880 8957496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1155 5 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 52.356 5.10e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju01g1155 HLH 2.3e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1155 01 8951880 8957496 Alju01g1155 01 8951880 8957496 ECH