Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1154 ATGGATATAGATGGCAAGCCAGAACTGAAATGGGAACGGTTTGTTAAAAATGAAGAGTTTGGAGTTGTACCAGATGGGTTTTTTGATGGCCTGAGATTTCCACCATATGGGTTTTTTGATGCAGAATCTGAATCTCGTGTATGGAATGGACATTACACTTACACTAGTGAACCTCTAATACAGGATTTGATGAACGAAAACGTAAAGGATTACACGGATGAGATCTACTGGAGTTCGGATGACGACAAGCCTCAAGAACCTGCTGGTGAAGTAAGACGCTCTTCAGTCATCAAGATACAGATCAAGAATCCTTACAGGGTCGAAAAGAAGAAGAGTGGATGTAGATGGCAAGCAAAGATATGTGAATTGTACCTGGGCACATTCGGGACGGAGAAGGATGCGGCCGAAGCATACGATATAGCGGCGATAAGATTGAAGAACCTGATCCCTGGCACCAGAGAATTGAATTTCGACTTGGAAAATTATAATACCGAAGAGATTCTTAAATGTAGTAAGATTCCAATCAGAGAGGGTGCTTGCAAGTGGATCAAGGAACTCACAGTGGAACAGTTTCTTAGAAAAAATAATATTGAAATCGTAGAAAGTAATGGTGAGGTTGGAGTTGTTCCATTCGGAGCAGAAAACCAGAGGGTGACGAATAGCGAGGGGTTTGTGTACATGGATGATAATGATGACGTGGCATTTCCACCAAATGATGAAGTATCTCTATGGAATAATGAAGAGTGTTATAGTGAACCTCTAATGGATCAGCATTTGGTGAGCAGAAATGATTCTTTGAATGATTTTGAAGGTCTTGATTCCACGGAGGATATCCAGATGAGTTTCGCTGACAAGGAGGAGCCTCAACAACCTTCTGGAAAAAACTCTCAGACAACACAAATTCTCTTCAGATTCAAGAATTTCTCTCTGAAGTTAGACGTTCCTTATCAAGATACAGATCAAGAATCCTTACAGATACATATGGAATCAATTAATTCATCATCCAACACTGCGACAGCTTCCTCTTCTGATCCGCCACCTCCTAATCAAGGGAATGGCGACAAGGGAAAACAAACTTGCAGCAGCAACGAGAGCGAAGCAAATGAGAACAAGAATAGTAACCCGGAGAGCAGTGTTCTTGAAGCAGGAAACAAAGGGAAATCCTCAAGTTATGTGTATATGGATGATAATGATGATCTGAAATTGCTACCAGATGGGTTTTTCGAAACAGGATCTCCTTCGAATAATGAACCTCTAATGGAGAATCAGACGGTGGCGAATGAACCTCTCATGGAGCATTTGGCGAGCGGAAATGATTCGTTGATTGATTTTAAAGATCTTGATGCCACGGAGGATGTGGAGAAGAGTTTTGCTGACGAGGACCCTGCTGTTAATATCCGTGGTTTTCTTCCACAGCTCTCTGATGTTCAAAAACCAATAGAAGTATCTGATATAAATAAATATGCCTTAAGGAATAATGCACGGTTTTCCAAATCTGTTCAAAGTTCTGTATTGAAGATCAAGAATCCCTACAAGATATGGAATCAAATAATCCATCACCCGCCGCAAGTTCCTCTCACAACACTGAACACTGTGACATCAGCTTTCTCTTCTGAGGTCTGCACAAGCCAAACAATGTTGCCTGATCAAAGGAATGATGACAAAGGAACACAAACTTGCAGCAGGAGTGAAAAGCGTGGTCCAAGTAAAAATCAACGTCTGAAAACTTGCAAGTTCTTGGGAGTTAGAAGAGATATGAGCAGAGGGGAGTGCCTTGCTGCTATCAGAATTGTTGGTATTAATTTTCTGGGTCTGCATCATCGATCAGAGACGGAGGAGGAGGCGGCTAGAGCACATGATATAGCGACGATAAGATTGAAGGGCCCGGCCGCAGCCAGAAATTTGAATTTGAGGTGGAAATCTGATGATATAGAAAGCATTGTTAAAAGTAGTAAGATCCCGATCGGAAAGGGTGCTTCCGAGATGATCAAGGCACGCACAGCTGATGAGATTCTTTTGCACATGACTGACGACCCACCTTCCACCACCACCTCCTCCTCCGAACAGTATCGTCCGAGCAGAAAACCAGACGGTGGCGATCGAATAACAAAGCGTTTGTGTATTGCGGATCCGGATAATACTGACCTGAAATTGGCACCGGATTGGGTCTTGATTCGATTTATGGAGGATATGGACAAGGAGCCTCAAGAATCTGCTGGTGGGTCGAATCAGGCTAATAGATAA 2244 0.4269 MDIDGKPELKWERFVKNEEFGVVPDGFFDGLRFPPYGFFDAESESRVWNGHYTYTSEPLIQDLMNENVKDYTDEIYWSSDDDKPQEPAGEVRRSSVIKIQIKNPYRVEKKKSGCRWQAKICELYLGTFGTEKDAAEAYDIAAIRLKNLIPGTRELNFDLENYNTEEILKCSKIPIREGACKWIKELTVEQFLRKNNIEIVESNGEVGVVPFGAENQRVTNSEGFVYMDDNDDVAFPPNDEVSLWNNEECYSEPLMDQHLVSRNDSLNDFEGLDSTEDIQMSFADKEEPQQPSGKNSQTTQILFRFKNFSLKLDVPYQDTDQESLQIHMESINSSSNTATASSSDPPPPNQGNGDKGKQTCSSNESEANENKNSNPESSVLEAGNKGKSSSYVYMDDNDDLKLLPDGFFETGSPSNNEPLMENQTVANEPLMEHLASGNDSLIDFKDLDATEDVEKSFADEDPAVNIRGFLPQLSDVQKPIEVSDINKYALRNNARFSKSVQSSVLKIKNPYKIWNQIIHHPPQVPLTTLNTVTSAFSSEVCTSQTMLPDQRNDDKGTQTCSRSEKRGPSKNQRLKTCKFLGVRRDMSRGECLAAIRIVGINFLGLHHRSETEEEAARAHDIATIRLKGPAAARNLNLRWKSDDIESIVKSSKIPIGKGASEMIKARTADEILLHMTDDPPSTTTSSSEQYRPSRKPDGGDRITKRLCIADPDNTDLKLAPDWVLIRFMEDMDKEPQESAGGSNQANR 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1154 747 ProSiteProfiles AP2/ERF domain profile. 104 158 IPR001471 GO:0003700|GO:0006355
Alju01g1154 747 SMART rav1_2 578 642 IPR001471 GO:0003700|GO:0006355
Alju01g1154 747 SMART rav1_2 104 164 IPR001471 GO:0003700|GO:0006355
Alju01g1154 747 MobiDBLite consensus disorder prediction 333 384 - -
Alju01g1154 747 MobiDBLite consensus disorder prediction 677 692 - -
Alju01g1154 747 SUPERFAMILY DNA-binding domain 114 157 IPR016177 GO:0003677
Alju01g1154 747 MobiDBLite consensus disorder prediction 544 572 - -
Alju01g1154 747 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 117 379 - -
Alju01g1154 747 MobiDBLite consensus disorder prediction 675 703 - -
Alju01g1154 747 MobiDBLite consensus disorder prediction 555 571 - -
Alju01g1154 747 Gene3D AP2/ERF domain 100 160 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1154 Alju-ChrAlju01 8927841 8942194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1154 579 670 AP2-EREBP Transcription Factor Family AT3G20840 37.895 4.28e-08 54.7