Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1124 ATGGAAGTACGAACTATCGTCGACAAGGCAGGCCGTGCCCATGATCACCCAGCTAGGAATCTTTTAGTCCAATGAGGAGTACTAATTATCAGTGGCTTCAAAAGTGTCAATCCCTTCACAAAAGCAACCTCAATACCAAATCCTCACTCTCCCCCTCTCGAGACCTTTCTGCAACTCGAGAGTGTGAGAGCGATGGAAATGGCACTCAATACGCACAGAGTCTCCTTCTCCATGGCTAGTCCTTTTAGCCTTCGAAGGACCTTTTATCCTCCCCAGTTTGCTAACCAACTACCTGGCCTTCCATTTTCTTCCTCAAAGCCCACCAAACTGCTTGTTTCCAGGAACTCTACTTGCGGGCCCATCAAATGCTCAGTTTCTGAAGCTATGGAACCCAAGACTGAGAAGAAGAAACAGCTGGAGAGAAGAAGAGACATAAGAAACATAGCAATTGTGGCTCATGTTGATCATGGGAAAACAACTTTAGTTGATGCGATGCTGAAACAAACCAAGGTATTTCGTGATAATCAATTTGTACAGGAAAGAATAATGGATTCAAATGATTTGGAACGTGAAAGAGGAATCACAATACTAAGTAAAAATACATCTGTCGCCTATAAAGACACCAAGATTAATATAATAGATACTCCAGGTCACTCTGACTTCGGAGGTGAAGTGGAGCGCATTCTAAATATGGTGGAAGGAATCCTTTTAGTGGTAGACTCTGTTGAAGGTCCAATGCCACAAACAAGATTTGTTTTAAAGAAGGCCCTTGGGTTTGGGCATGCAGTTCTTGTTGTTGTCAATAAAATTGATAGACCTTCTGCTCGGCCGGACTTTGTCATCAATTCCACTTTTGAACTGTTTCTTGAACTAAATGCATCAGACGAACAGTGTGACTTCCAAACAATATATGCTAGTGGCATAAAGGGACAAGCAGGACTAACTCCTGAAAATTTGGCAGAAGATCTTGGCCCATTGTTTGAAGCTATAGTCAGATGCATCCCTGGACCACATATTGACAAAGATGGTGCACTGCAAATGCTTGCTACAAATATTGAGTATGATGAACATAAAGGGCGTATAGCAATTGGACGCTTGCAAGCTGGAGTATTAGAAAAGGGCATGGATGTCAGGGTATGTACTACTGAAGATTCATGCAGATATGGAAGAGTTAGTGAGCTTTTTGTGTATGACAAATTCAGTAGGGTCCCAGCAGAACGTGTGGAGGCTGGTGATATCTGTGCTGTATGTGGAATTGCTGATATTCAGATTGGGGAAACAATTGCTGACAAAGTATTGGGGAAGCCACTGCCATCCATCAGGGTGGAAGAACCTACAGTGAAGATGTCTTTTTCTATAAACACTTCACCTTTTGTTGGGCGGGAGGGAAAGTATGTTACTAGTAGGAATTTAAGGGATAGGCTCCATCGTGAGCTAGAGCGAAATTTGGCCATGAGAGTTGAAGATGGTGAAACAGCAGATACCTTTATTGTCAGTGGTCGTGGTACTTTGCACATAACCATACTCATAGAAAATATGCGAAGAGAAGGATATGAATTCATGGTAGGTCCTCCCAAAGTTATCAACAAGAAAGTGGGTGACCAACTGCTGGAACCATTTGAGATTGCCACTGTGGAGGTACCAGAAGAACACATGGGAGCTGTTGTTGAACTTCTGGGCAAGAGACGAGGGCAAATGTTCGATATGGAAGGAGTTGGATCGGAAGGAACCACCCTACTCAAATATAAGATTCCAACCCGTGGCCTTTTGGGATTGCGGAATTCTATCTTAACAGCTTCCCGTGGAACAGCAATTCTCAACACTATCTTTGATAGCTATGGGCCTTGGGCTGGGGACATCATTACTCGGGATCAAGGTTCACTGGTTGCTTTTGAAGATGGAACAAGTACTTCTTATGCTCTTGCTAGTTCACAGGAGAGAGGACATATGTTTATTGGTCCTGGAGTGGATGTTTACAAAGGTCAAATTGTTGGCATCCATCAGCGACCTGGGGATTTGGCCTTAAATGTTTGCAAGAAAAAGGCTGCAACAAACATTCGTTCCAACAAGGAACAAACAGTGATTCTTGATACACCATTGGATTATAGTCTGGACGATTGCATCGAGTACATTCAAGAAGATGAACTAGTAGAGGTCACTCCCCAGAGCATCCGAATGTGCAAGAATCCTAAACTAGCAAAGAAAACAAGGTAG 2214 0.4313 MEVRTIVDKAGRAHDHPARNLLVQXGVLIISGFKSVNPFTKATSIPNPHSPPLETFLQLESVRAMEMALNTHRVSFSMASPFSLRRTFYPPQFANQLPGLPFSSSKPTKLLVSRNSTCGPIKCSVSEAMEPKTEKKKQLERRRDIRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVAYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALGFGHAVLVVVNKIDRPSARPDFVINSTFELFLELNASDEQCDFQTIYASGIKGQAGLTPENLAEDLGPLFEAIVRCIPGPHIDKDGALQMLATNIEYDEHKGRIAIGRLQAGVLEKGMDVRVCTTEDSCRYGRVSELFVYDKFSRVPAERVEAGDICAVCGIADIQIGETIADKVLGKPLPSIRVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLHRELERNLAMRVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVGDQLLEPFEIATVEVPEEHMGAVVELLGKRRGQMFDMEGVGSEGTTLLKYKIPTRGLLGLRNSILTASRGTAILNTIFDSYGPWAGDIITRDQGSLVAFEDGTSTSYALASSQERGHMFIGPGVDVYKGQIVGIHQRPGDLALNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPQSIRMCKNPKLAKKTR 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1124 737 Gene3D Translation factors 339 439 - -
Alju01g1124 737 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 140 314 - -
Alju01g1124 737 Pfam Elongation factor G C-terminus 535 621 IPR000640 -
Alju01g1124 737 CDD BipA_TypA_II 345 438 IPR047042 -
Alju01g1124 737 FunFam GTP-binding protein TypA 623 709 - -
Alju01g1124 737 NCBIfam translational GTPase TypA/BipA 145 733 IPR006298 GO:0003924|GO:0005525
Alju01g1124 737 FunFam GTP-binding protein TypA 529 622 - -
Alju01g1124 737 CDD BipA_III 445 523 IPR047043 -
Alju01g1124 737 Gene3D bipa protein 623 702 IPR042116 -
Alju01g1124 737 SUPERFAMILY Translation proteins 292 437 IPR009000 -
Alju01g1124 737 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 346 IPR027417 -
Alju01g1124 737 Pfam Elongation factor Tu domain 2 359 428 IPR004161 GO:0005525
Alju01g1124 737 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 143 338 IPR000795 GO:0003924|GO:0005525
Alju01g1124 737 Pfam Elongation factor Tu GTP binding domain 144 335 IPR000795 GO:0003924|GO:0005525
Alju01g1124 737 FunFam GTP-binding protein TypA 446 550 - -
Alju01g1124 737 FunFam GTP-binding protein TypA 142 338 - -
Alju01g1124 737 Gene3D Elongation Factor G (Translational Gtpase), domain 3 446 729 - -
Alju01g1124 737 SUPERFAMILY EF-G C-terminal domain-like 538 652 IPR035647 -
Alju01g1124 737 CDD BipA_TypA_C 538 617 IPR035651 -
Alju01g1124 737 PRINTS GTP-binding elongation factor signature 147 160 IPR000795 GO:0003924|GO:0005525
Alju01g1124 737 PRINTS GTP-binding elongation factor signature 263 272 IPR000795 GO:0003924|GO:0005525
Alju01g1124 737 PRINTS GTP-binding elongation factor signature 191 199 IPR000795 GO:0003924|GO:0005525
Alju01g1124 737 PRINTS GTP-binding elongation factor signature 211 221 IPR000795 GO:0003924|GO:0005525
Alju01g1124 737 CDD TypA_BipA 144 337 IPR047041 -
Alju01g1124 737 Gene3D - 142 338 IPR027417 -
Alju01g1124 737 FunFam GTP-binding protein TypA 339 439 - -
Alju01g1124 737 Gene3D - 529 622 - -
Alju01g1124 737 NCBIfam small GTP-binding protein domain 145 278 IPR005225 GO:0005525
Alju01g1124 737 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 184 199 IPR031157 -
Alju01g1124 737 SUPERFAMILY EF-G C-terminal domain-like 443 527 IPR035647 -
Alju01g1124 737 SMART EFG_C_a 535 624 IPR000640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1124 Alju-ChrAlju01 8686620 8695435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1124 143 272 Eukaryotic Initiation Factors Gene Family AT3G22980 43.939 6.30e-24 106