Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1101 ATGAATAAAATTCTATATTGGTTAGGTTCCAATTCTTTCATGGCCTCCTCTTCCTCTGACCCTAGCAAGTCTGAAGTTGGCTGCGGCGGCGGCGGCGGTAGTGCAGAGGTTTCGGATGCAGCGATGGCAAATGATAAGCTCTTACTCTACAGGGGACTGAAGAAAGCGAAGAAAGAAAGGGGGTGTACAGCTAAAGAGCGCATCAGCAAGATGCCTCCTTGTGCTGCGGGGAAACGCAGCTCCATATATCGTGGTGTCACCAGGCATAGATGGACCGGTCGTTATGAGGCCCATCTTTGGGATAAAAGTACATGGAACCAGAATCAGAATAAAAAGGGAAAACAAGGTGCATATGATGACGAGGAGGCTGCAGCTAGAGCTTATGACCTTGCTGCTCTGAAGTACTGGGGTCCAGGGACTCTAATCAACTTTCCAGTGACTGATTATACAAGAGACCTTGAAGAAATGCAAAATGTTTCAAGAGAGGAATACCTTGCATCTTTACGGCGGAAGAGCAGTGGTTTTTCTAGAGGAATCTCTAAATATCGTGGACTCTCCAGCCGATGGGAGCCATCATATGGTAGAATGGCTGGATCTGATTACTTCAACAGTATACATTATGGGACAGGTGATGATTCAGCAGCAGAAAGTGAATATGTTAGTGGTTTCTGCATAGAACGAAAGATTGATTTAACAAATTACATCAAGTGGTGGGGATCCAGTAAAAATCGCCAAACTGATGCTGGAACAAAATCATCAGAAGAAAAAAAACAAGGATTTGCGGGAGATATTTGTGGTGAGCTCAAAACGCTGGAGCAGGAACTCCAAGCCACGGAACCATACAAGATGCCACGGTTAGGCTTGCCCCATGATAGGAAAAAGCATAAAAGTTCTGCTGTCTCTGCCTTAACTATTTTATCACGGTCAGCAGCCTACAAGAGCCTGCAAGAGAAAGCATCAAAGACACGAGAAAATTACACTGATAATGATGAGAATGAGAACAAAAATACCATCAATAAGTTGGACCATGGCAAGGCACTTGAGAGATCACCAAATTATAATGGTGTGGATGAAAGGCTTGACATTGCAATGGGAATGAGCGGGGCATTGTCTATTCAAAGAAATGTTTACCCCTTGACTTCATTCTTGTCTGCACCGCTTTTGACAGCCTACAATACTGCCGATCCCATGGTAGATCCTGTTCTCTGGACATCTCTTGTTCCTATGCTTCCTGCTGGCCTTTCTCGGACAGCCGAGGTCACCAAGACCGAGAGCAGTTCCACTTACACCATATTTCAGCCAGAGGAGTGA 1311 0.4516 MNKILYWLGSNSFMASSSSDPSKSEVGCGGGGGSAEVSDAAMANDKLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNVSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGRMAGSDYFNSIHYGTGDDSAAESEYVSGFCIERKIDLTNYIKWWGSSKNRQTDAGTKSSEEKKQGFAGDICGELKTLEQELQATEPYKMPRLGLPHDRKKHKSSAVSALTILSRSAAYKSLQEKASKTRENYTDNDENENKNTINKLDHGKALERSPNYNGVDERLDIAMGMSGALSIQRNVYPLTSFLSAPLLTAYNTADPMVDPVLWTSLVPMLPAGLSRTAEVTKTESSSTYTIFQPEE 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1101 436 MobiDBLite consensus disorder prediction 317 352 - -
Alju01g1101 436 SUPERFAMILY DNA-binding domain 81 146 IPR016177 GO:0003677
Alju01g1101 436 PRINTS Ethylene responsive element binding protein signature 127 147 IPR001471 GO:0003700|GO:0006355
Alju01g1101 436 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Alju01g1101 436 Gene3D AP2/ERF domain 82 147 IPR036955 GO:0003700|GO:0006355
Alju01g1101 436 ProSiteProfiles AP2/ERF domain profile. 82 145 IPR001471 GO:0003700|GO:0006355
Alju01g1101 436 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 41 288 - -
Alju01g1101 436 SMART rav1_2 82 151 IPR001471 GO:0003700|GO:0006355
Alju01g1101 436 Pfam AP2 domain 82 137 IPR001471 GO:0003700|GO:0006355
Alju01g1101 436 FunFam AP2-like ethylene-responsive transcription factor 81 147 - -
Alju01g1101 436 MobiDBLite consensus disorder prediction 316 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1101 Alju-ChrAlju01 8458633 8463202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1101 43 420 AP2-EREBP Transcription Factor Family AT2G41710 66.237 3.45e-165 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Alju01g1101 AP2 2.2e-09 CL0081