Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1098 ATGGGCACTGCGAGGAGGCAATTAAAGGTTATGCTATGGAAGAATTGGCTTCTCAAAATTCGTCATCCGTTTGCAACAAGTGCTGAGATTTTGCTCCCAACTTTAGTGATGTTGCTGTTGATAGCCGTAAGGACTCGGGTTGATACAAAAATACATCCGGCACAACCGCACATCCAAGAAGGGATGTTTGTAGAAGTGGGCAGGGGTATTTCTCCGAGCTTCCAACAACTTTTGGAAGTTTTGTTGGCCAAGAGAGAGTATATAGCCTTTGCCCCTAACACAACAGAGACTGAGCAAATGATAGACATAATGTCAATAAAATTTCCCCTCTTAAAGCTTGTCAGTAAAATATACAAAGATGAGGCGGAGCTGGAGACTTACATACGCTCAGATTTATATGGCACCTGTAATCAAGCAAGGAATTGTTTATATCCAAAAATCAAAGGAGCAGTGGTATTTCATGAACAAGGTCCTAAGTCATTTGATTACAGCATACGCCTAAACCATACATGGGCTTTCTCTGGTTTTCCTGATGTTAAAACCATAATGGACACAAATGGCCCTTTTGTCCGTGACTTGGATCTTGGTGTTAGTGCAATACCATCAATGCAGTACAGCTTCAGTGGGTTTTTGACTCTCCAGCAAGTTGTTGATTCGTTTATAATATTCATGGCTCAGCAGTCTGACATAACCCCTAGCACTGAAAGTGTAGAGTATCCTCTGCCACGCTCCAATGATACTGATTTTTCTTTGAAAATTCCATGGACTCAGTTTACCCCTGCTCACATACGAATGGCTCCATTTCCCACGCGAGAGTACACTGATGATCAGTTCCAGTCAATTGTGAAGAATTTCATGGGGATTTTGTACTTGTTGGGATTTCTGTATCCAATTTCTCGACTGATCAGTTATTCTGTGTTTGAGAAGGAACAGAAAATTAAGGAAGGGCTCTACATGATGGGCCTGAAAGACGGTGTGTTCCATCTCTCATGGTTTATAACATATGCTTTGCAGTTTGCAATCTCTTCTGGAATCATCACAGCTTGCACAATGGACAATTTATTCAAGTATAGTGACAAGACACTGGTGTTTGCATACTTCTTCCTTTTTGGGCTTAGTGCAATTATGTTGTCATTTTTTATATCAACATTTTTCAACCGGGCTAAAACGGCCGTAGCTGTTGGAACCCTTTCTTTCTTTGGTGCCTTTTTCCCTTATTACACTGTGTATGACGAGGCAGTCTCTATTGTCTTAAAGATTGTTGCTTCTTTGCTTTCACCTACGGCTTTTGCTCTGGGGTCTATCAACTTTGCTGATTATGAGCGTGCTCATGTTGGACTTCGTTGGAGCAACATATGGCGGGATTCATCTGGAGTAAATTTTTTGTTCTGTTTTCTGATGATGCTGCTTGATACACTGCTGTATTGTGCGGTTGGTCTTTATCTTGATAAGGTTCTTCCAAGGGAGTATGGATCACAATATTCATGGAACTTTATTTTCCAAAAAGGCTTTTGGAGGAAGAAACAAGCTGTAAAACATTGTTCCTCCAGTTCAGACATAGAAATTGCGGATAAGATTTCCAAGTTGAAGGGAAATTTTCTAGCAGAAAATGCTTCCAAACCTGCTATAGAAGCCATAAGTTTGGACATGAAACAACAAGAGATTGATGGCAGGTGCATTAAAATTAGGGATTTGCATAAAGTGTATGCTTCTAAAAAAGGCGCTTGCTGTGCTGTTAACTCATTACGACTTACATTGTATGAAAATCAAATTCTTGCTCTTCTAGGCCACAATGGAGCTGGAAAAAGCACGACAATCTCTATGCTTGTTGGTCTTCTTCCTCCTACTTCAGGGGATGCTTTGGTGTTTGGAAAGAATATTTTAACTGATATTGATGATATACGGAAGGTTTTGGGTGTCTGCCCCCAAAATGACATACTTTTTCCAGAGTTGACTGTGAGAGAGCATCTAGAAATATTTGCAGCATTAAAGGGTGTGGAGGAAGACTCTTTAAAGGATGTTGTTTCCAGTATGGTGGATGAGGTGGGTTTGGCTGATAAAATTAACACTCTAGTGGGAGCTCTTTCTGGTGGCATGAAGAGGAAACTGTCTCTTGGAATTGCATTGATAGGAAACAGCAAGGTTATAGTTCTTGATGAGCCTACTAGTGGAATGGATCCATACTCAATGCGCTTGACTTGGCAGCTAATTAAAAAAATAAAAAAAGGAAGGATAATATTACTGACAACACACTCTATGGATGAAGCAGATGAACTGGGTGATCAGATAGCTATCATGGCCAATGGTTCTTTGAAATGCTGTGGAAGTTCCCTTTTCTTGAAGCACCACTATGGTGTTGGTTATACTTTAACTCTTGTGAAGTCTGCACCAACTGCTTCAGTAGCTTCTGATATTGTCAAACGCCATGTTCCATCAGCTACTTGTGTGAGTGAGGTGGGAACTGAGATTTCCTTCAGGCTTCCTCTTCTGTCCTCATCAGCCTTTGAGAGCATGTTCAGGGAAATTGAAAGTTGCTTGAGAAAATCAGTTTCTAAGTTGGAATCCACTGATCATGATGGAAAAGCAAGTCTTGGTATTGAAAGCTATGGTATATCTGTCACAACCCTGGAGGAGGTATTCTTGCGAGTTGCAGGATCAGACTATGATGATGTTGAATGTTTTGAGGAGAAAAATTGCCCCTTTATATCAGATTCTTTGCCTTCTCATGCTTCTTATGATCATCCATCCAAAATCAGATGGCTTTTCGAATTTCTTGGAAATTACAGGAAGATTATTGGATTCATATCTAGCATAGTGGCAAGAGCTTGTTATTTAGTCTTTGCTACAGTGTCAAGTCTCATAAGCTACTTGAGTATGCTATGTTGTAGCTGTTGTGTCATTACCAGGTCCACATTTTGGCAGCATTCCAAGGCTTTGTTCATTAAGAGAGCAATATCTGCTCGCAGGGATCACAAAACCATTGTTTTCCAGCTTCTGATTCCTGCTGTCTTCTTATTTATTGGCCTTCTGTTTCTCAAGCTTAAGCCACATCCTGATCAGCAGTCCTTGATTCTTACAACATCTTATTTTAATCCCTTGCTGAGCGGAGGTGGTGGGGGAAGTCCAATTCCGTTTAATTTTTCTTTTCCAATTGCTGAAGAGGTAGCCAATCATGTTAAAGGAGGGTGGATTCAAAGGGCCAAACCAGCTGTATATGAATTCCCTAATCAAGAAAAGGCATTACATGAAGCAGTGGAAGCAGCAGGGCCAATTCTTGGACCTGCTTTACTTTCGATGAGTGAATATTTGATGTCTAGCTTTAATGAATCTTACCAGTCTAGGTATGGAGCAATTTTAATGGATGAGCAGTACAATGATGGAAGCTTAGGCTACACTGTTCTACATAACTGTTCTTGCCAGCATTCTGGTCCAACCTTTATCAATTTGATGAATGCCGCAATTCTCAGGCTTGCTAGTGGTGACATGAATATGACCATTCAGACACGTAACCACCCTCTACCAATGACACAAAGCCAGCTCTTACAACGTCATGATCTGGACGCTTTTTCGGCTGCAATAATTGTCAATATTGCCTTCTCTTTCATACCCGCCTCATTTGCTGTTTCTATTGTAAAGGAACGGGAAGTTAAAGCTAAGCACCAACAACTAATCAGTGGGGTTTCTATTTTTTCATATTGGGCTTCTACATTTATATGGGACTTTGTGAGCTTCTTGTTTCCTACCTCTGTTGCGGTTGTTCTCTTTCACATCTTTGGTTTGGATCAGTTTATTGCTGGGCCTTCTTTGCTGCCAACAGTCCTCATGTTTTTGGAGTATGGGCTGGCAATTGCATCATCAACATACTGCCTCACATTTTTCTTTTCTGACCATACCATGGCTCAGGTGTGGGGGGATTTCAATCTATCATTTCTTTAA 3936 0.4075 MGTARRQLKVMLWKNWLLKIRHPFATSAEILLPTLVMLLLIAVRTRVDTKIHPAQPHIQEGMFVEVGRGISPSFQQLLEVLLAKREYIAFAPNTTETEQMIDIMSIKFPLLKLVSKIYKDEAELETYIRSDLYGTCNQARNCLYPKIKGAVVFHEQGPKSFDYSIRLNHTWAFSGFPDVKTIMDTNGPFVRDLDLGVSAIPSMQYSFSGFLTLQQVVDSFIIFMAQQSDITPSTESVEYPLPRSNDTDFSLKIPWTQFTPAHIRMAPFPTREYTDDQFQSIVKNFMGILYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDGVFHLSWFITYALQFAISSGIITACTMDNLFKYSDKTLVFAYFFLFGLSAIMLSFFISTFFNRAKTAVAVGTLSFFGAFFPYYTVYDEAVSIVLKIVASLLSPTAFALGSINFADYERAHVGLRWSNIWRDSSGVNFLFCFLMMLLDTLLYCAVGLYLDKVLPREYGSQYSWNFIFQKGFWRKKQAVKHCSSSSDIEIADKISKLKGNFLAENASKPAIEAISLDMKQQEIDGRCIKIRDLHKVYASKKGACCAVNSLRLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNILTDIDDIRKVLGVCPQNDILFPELTVREHLEIFAALKGVEEDSLKDVVSSMVDEVGLADKINTLVGALSGGMKRKLSLGIALIGNSKVIVLDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDQIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASVASDIVKRHVPSATCVSEVGTEISFRLPLLSSSAFESMFREIESCLRKSVSKLESTDHDGKASLGIESYGISVTTLEEVFLRVAGSDYDDVECFEEKNCPFISDSLPSHASYDHPSKIRWLFEFLGNYRKIIGFISSIVARACYLVFATVSSLISYLSMLCCSCCVITRSTFWQHSKALFIKRAISARRDHKTIVFQLLIPAVFLFIGLLFLKLKPHPDQQSLILTTSYFNPLLSGGGGGSPIPFNFSFPIAEEVANHVKGGWIQRAKPAVYEFPNQEKALHEAVEAAGPILGPALLSMSEYLMSSFNESYQSRYGAILMDEQYNDGSLGYTVLHNCSCQHSGPTFINLMNAAILRLASGDMNMTIQTRNHPLPMTQSQLLQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSIFSYWASTFIWDFVSFLFPTSVAVVLFHIFGLDQFIAGPSLLPTVLMFLEYGLAIASSTYCLTFFFSDHTMAQVWGDFNLSFL 1311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1098 1311 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 793 IPR003439 GO:0005524
Alju01g1098 1311 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1099 1302 IPR026082 GO:0016020|GO:0055085|GO:0140359
Alju01g1098 1311 Gene3D - 547 796 IPR027417 -
Alju01g1098 1311 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524|GO:0016887
Alju01g1098 1311 CDD ABC_subfamily_A 560 781 - -
Alju01g1098 1311 Pfam ABC-2 family transporter protein 992 1302 IPR013525 GO:0016020|GO:0140359
Alju01g1098 1311 Pfam ABC-2 family transporter protein 256 478 IPR013525 GO:0016020|GO:0140359
Alju01g1098 1311 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 557 799 IPR027417 -
Alju01g1098 1311 FunFam ATP-binding cassette sub-family A member 12 526 797 - -
Alju01g1098 1311 SMART AAA_5 588 770 IPR003593 GO:0016887
Alju01g1098 1311 Pfam ABC transporter 580 723 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1098 Alju-ChrAlju01 8411639 8433143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1098 540 826 Calmodulin-binding Proteins AT2G36910 25.085 4.13e-17 85.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1098 01 8411639 8433143 Alju01g1098 01 8411639 8433143 ECH