Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1097 ATGATCAAAAAGTGGTGGAAAAATATCATCCCACGTAATACTCCTCCTTATCTGGAAAATCTATTAGAACCTTCCCTGGAAACTGTTGATATGGACTTTGATGAAGATGTAGATGTGAAAACAGAAAGAAACAGAGTTCTGTCAGGTTCCCTTGACAATGCCATCATCTATTTGTGCAACCTCCGTAAGGTCTATTATGAAGGGAAGCTTCACCAGCAAAAGGTTGCAGTTGATTCGTTAACCTTTGCAGTTCAGGAAGGAGAATGCTTTGGCTTTTTAGGGACAAATGGAGCTGGAAAGACCACAACTTTGTCTATGTTGTGCGGAGAAGAATCTCCATCTGACGGGACTGCTTTTATTTTTGGCAAGGATATATGTTCTCATCCCAAGGCTGCTCGCCGGCATATTGGTTATTGTCCGCAATTCGATGCTCTATTGGAATATTTGACTGTACAAGAACATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCTAGTTACATAGTAGATGAGGTTGTTTTGGAAAAGTTAGAGGAGTTTGACTTGCTAAAGCATGCTAATAAGCCATCATTTTCTCTTAGTGGAGGAAATAAAAGGAAATTGTCTGTCGCAATTGCGATGATTGGAAATCCTCCTATAGTCATTCTTGATGAGCCATCCACAGGTATGGATCCCATTGCCAAACGTTTCATGTGGGATGTAATATCTAGGATCTCAACAAGACGAGGAAAGACAGCAGTAATTCTAACTACCCACAGCATGAATGAAGCTCAAGCATTGTGTACGAGAATAGGAATAATGGTTGGTGGCCGATTAAGATGTATTGGGAGTCCACAGCACTTGAAAACAAGATTTGGGAATCATCTGGAATTAGAGGTGAAACCTACTGAAGTGAGCTTTGAGGACTTAGAAATACTCTGTAAAGCTATACAAGAAAGACTTTTTGATGTTCCTTCTCATCCAAGGAGCTTACTTGACGGCCTTGAAATTTGTATTGGAGGTGCTGACTCCATTTCATCAGATTCCTCTTTCTCAGAAATTAGCTTGTCGCGGGAAATGATTGTCTTCATTGGACGCTGGCTTGGTAATGAAGAAAGAATAAAGATGCTTATCTCTTGCACACCTGTATCCGATGGGGCTTGTAGTGAACTGTTATCTGAACAACTGTTCCGAGACGGTGGTATTCCATTGCCGGTATTTTCTGAGTGGTGGCTGTCCAGAGAAAAGTTCTCGGCAATAGATTCATTTATTATATCTTCTTTTCCTGGAGCAAGATGTCAGGGGTGCAATGGTTTGAGTATGAGATACCAGTTACCATATGGTGAAGGCGTTTCTCTTGCGGATGTTTTCGGAGTTCTTGAAGGGAACAGTGTCTGTGTCAACCAGAGTGGACCTTCTAGATATATTAGAGATTATCATTCTTTGTTCTCGAAACGAAATCGATATCAAATCAGGGAACTGCAGGCAATGGCTACTGCGACGATAGGAATCGGAGTTGGAACCTTTCCGACTCACCGAGTTACCATGGCCACCCGTTCCTCAAACGCACCTCCTCCGTCGCATGGTATCATCTTTCTCAGGACTTGGCCGGCGAGGCGTCTCCGGGTTAACTCTCTTCGAACTCGTTCCTCCCTGCTCAGAGTCCGAGCGTCGGCGGCGGACGAATCTCTCTCACCAGGAAAAGGTGTTGAGAATGTAGTAATTATAGGTTCAGGCCCTGCAGGATACACAGCAGCAATATATACTGCACGTGCCAACTTGAAGCCTGTAGTGTTTGAGGGGTACCAAGTGGGTGGTGTTCCTGGGGGTCAGTTGATGACTACAACTGAGGTAGAGAATTTTCCAGGATTTCCAGATGGGATAAGTGGTCCTGATCTGATGGACAGGATACGGCGTCAAGCTGAACGATGGGGAGCAGAACTGTTCCAAGAAGATGTCGAAGTGATTGATGTAAAAGGCAGTCCTTTTACCGTACAAAGTAGTGAACGTAAGATTAAATGCCATACTATCATTGTTGCTACTGGAGCTACTGCAAAAAGACTTAGGCTGCCTCGAGAAGATGAATTTTGGAGCCGGGGAATTAGTGCTTGTGCTATTTGTGATGGAGCATCACCTCTTTTTAAAGGCCAAGTTCTTGCTGTCGTTGGAGGTGGAGATACGGCTACTGAGGAAGCATTATACTTGACTAAATATGCTCGTCATGTTCACTTACTTGTACGTAGGGACCAACTAAGGGCTTCTAAAGCAATGCAAGATAGAGTGTACAACAATCCCAATGTCACCGTGCACTTCAATACAGAAGCTGCGGATGTTGTGAGTGATACTAAAGGACAGATGTCTGGTATTTTAATTAGAAAGGTTAATACTGGGGGGGAATCTGTGCTTGAGGCAAGAGGGCTATTTTATGGCATAGGTCATTTGCCAAATAGCCAACTATTGCAAGGCCAAGTTGAGCTAGACCACTCTGGTTACATAGTAGTTGATGAGGGTACTGCAAAAACTTCAATGGAAGGTGTATTTGCTGCTGGAGATGTACAGGACCATGAATGGAGGCAGGCCATTACGGCTGCTGGATCTGGATGTATCGCTGCTTTATCTGCTGAGAGATATCTTGTGAGCAAAGATCTTCTTATAGAGTTCCATCAGCCTAAAACTGAAGAGGTCAAGAAAGAACTCACAGACAGAGACGTCCAAGAGGGCTTTGACATCACACTCACAAAACACAAGGGACAGTACGCCCTACGGAAACTGTACCATGAAAGTCCAAGGCTTATATGTGTACTGTATACATCACCAACATGTGGTCCATGTAGGACTTTGAAGCCTATTCTTAGCAAGGTGATCGATGAATTTGATCAGAAGGTTCATTTTGTCGAAATTGATATAGAAGAAGATCCAGAAATAGCAGAAGCTGCTGGAATCATGGGTACACCATGTGTGCAGTTTTTCAAAAACAAGGAGATGCTTAGGACCGTTTCAGGAGTCAAAATGAAGCGGGAGTATAGAGATTTCATTGAAGAAAATAAATGA 3030 0.4323 MIKKWWKNIIPRNTPPYLENLLEPSLETVDMDFDEDVDVKTERNRVLSGSLDNAIIYLCNLRKVYYEGKLHQQKVAVDSLTFAVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAARRHIGYCPQFDALLEYLTVQEHLELYARIKGVPSYIVDEVVLEKLEEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGNPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNHLELEVKPTEVSFEDLEILCKAIQERLFDVPSHPRSLLDGLEICIGGADSISSDSSFSEISLSREMIVFIGRWLGNEERIKMLISCTPVSDGACSELLSEQLFRDGGIPLPVFSEWWLSREKFSAIDSFIISSFPGARCQGCNGLSMRYQLPYGEGVSLADVFGVLEGNSVCVNQSGPSRYIRDYHSLFSKRNRYQIRELQAMATATIGIGVGTFPTHRVTMATRSSNAPPPSHGIIFLRTWPARRLRVNSLRTRSSLLRVRASAADESLSPGKGVENVVIIGSGPAGYTAAIYTARANLKPVVFEGYQVGGVPGGQLMTTTEVENFPGFPDGISGPDLMDRIRRQAERWGAELFQEDVEVIDVKGSPFTVQSSERKIKCHTIIVATGATAKRLRLPREDEFWSRGISACAICDGASPLFKGQVLAVVGGGDTATEEALYLTKYARHVHLLVRRDQLRASKAMQDRVYNNPNVTVHFNTEAADVVSDTKGQMSGILIRKVNTGGESVLEARGLFYGIGHLPNSQLLQGQVELDHSGYIVVDEGTAKTSMEGVFAAGDVQDHEWRQAITAAGSGCIAALSAERYLVSKDLLIEFHQPKTEEVKKELTDRDVQEGFDITLTKHKGQYALRKLYHESPRLICVLYTSPTCGPCRTLKPILSKVIDEFDQKVHFVEIDIEEDPEIAEAAGIMGTPCVQFFKNKEMLRTVSGVKMKREYRDFIEENK 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1097 1009 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524|GO:0016887
Alju01g1097 1009 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 564 879 - -
Alju01g1097 1009 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 697 719 IPR008255 GO:0016491
Alju01g1097 1009 Pfam Pyridine nucleotide-disulphide oxidoreductase 565 859 IPR023753 GO:0016491
Alju01g1097 1009 ProSiteProfiles Thioredoxin domain profile. 894 1009 IPR013766 -
Alju01g1097 1009 SMART AAA_5 86 273 IPR003593 GO:0016887
Alju01g1097 1009 CDD TRX_NTR 910 1006 - -
Alju01g1097 1009 NCBIfam thioredoxin-disulfide reductase 565 871 IPR005982 GO:0004791|GO:0005737|GO:0019430
Alju01g1097 1009 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 56 294 IPR003439 GO:0005524
Alju01g1097 1009 CDD ABC_subfamily_A 56 282 - -
Alju01g1097 1009 Pfam ABC transporter 78 220 IPR003439 GO:0005524
Alju01g1097 1009 SUPERFAMILY Thioredoxin-like 917 1007 IPR036249 -
Alju01g1097 1009 SUPERFAMILY FAD/NAD(P)-binding domain 565 870 IPR036188 -
Alju01g1097 1009 Gene3D Glutaredoxin 911 1009 - -
Alju01g1097 1009 PRINTS FAD-dependent pyridine nucleotide reductase signature 797 813 - -
Alju01g1097 1009 PRINTS FAD-dependent pyridine nucleotide reductase signature 667 685 - -
Alju01g1097 1009 PRINTS FAD-dependent pyridine nucleotide reductase signature 824 846 - -
Alju01g1097 1009 PRINTS FAD-dependent pyridine nucleotide reductase signature 566 585 - -
Alju01g1097 1009 PRINTS FAD-dependent pyridine nucleotide reductase signature 711 729 - -
Alju01g1097 1009 FunFam Thioredoxin reductase 683 809 - -
Alju01g1097 1009 Pfam Thioredoxin 921 1006 IPR013766 -
Alju01g1097 1009 Gene3D - 568 870 IPR036188 -
Alju01g1097 1009 Gene3D - 683 809 IPR036188 -
Alju01g1097 1009 PRINTS Pyridine nucleotide disulphide reductase class-II signature 759 775 - -
Alju01g1097 1009 PRINTS Pyridine nucleotide disulphide reductase class-II signature 799 820 - -
Alju01g1097 1009 PRINTS Pyridine nucleotide disulphide reductase class-II signature 852 871 - -
Alju01g1097 1009 PRINTS Pyridine nucleotide disulphide reductase class-II signature 707 731 - -
Alju01g1097 1009 PRINTS Pyridine nucleotide disulphide reductase class-II signature 565 587 - -
Alju01g1097 1009 PRINTS Pyridine nucleotide disulphide reductase class-II signature 602 617 - -
Alju01g1097 1009 PRINTS Pyridine nucleotide disulphide reductase class-II signature 668 676 - -
Alju01g1097 1009 PRINTS Pyridine nucleotide disulphide reductase class-II signature 623 633 - -
Alju01g1097 1009 PRINTS Pyridine nucleotide disulphide reductase class-II signature 690 702 - -
Alju01g1097 1009 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 285 IPR027417 -
Alju01g1097 1009 FunFam ABC transporter A family member 1 45 299 - -
Alju01g1097 1009 Gene3D - 49 296 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1097 Alju-ChrAlju01 8392493 8405755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1097 80 281 Calmodulin-binding Proteins AT2G36910 24.402 7.31e-11 64.7