Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1080 ATGGGGTTCTTACCTTCTGACTGTTTTGAACATAGCAAGTTCTTATTTTTCATATTCTTCATAGTTGTGAACCTGGACTGTTTACCAATCAAAGCTAACTTATGCAGCAATAACTCTGTTGCTACCCCAAGAAATATTCCCGCCTATGATATTCTTTCATCATTGCAAACACTAGCTCTTGATGGTTACTTCAGTTTGGAAGACAATGGACATGCAGCCAAAGACTTCGGTAACATATACCATTGTCCTCCTCTGGCAATTCTGCATCCAAAAGCAGTTTCTGATATCTCACGCACAATAAAGCATATTTATGAAACAGATGCTGCTTCAGAACTAAAGATTGCAGCTAGAGGCCACGGTCACTCTCTTCAAGGTCAGGCACAAGCATATCAAGGCCTAGTTGTGAACATGGAGTCACTGGAGGGACCAGAAATGACTGTTGATGCTGGAGAATTCCCTTACGTGGATGTTTCAGCCGGTGAGTTATGGATAAACATTCTGCATGAGACTCTTAAGCATGGATTAGCACCTAAATCTTGGACAGATTATCTTCATCTTACTGCTGGGGGAACCCTATCAAATGCTGGAATAAGCGGACAAGCCTTCAGGCATGGACCCCAGATCGATAACATCTTCCAGCTTGAAGTAGTCACAGGAAAAGGAGAGATGCTTACCTGCTCAGAGAACCAGAATGCTGACCTTTTTTATGGTGTTCTTGGTGGGCTTGGTCAATTTGGCATCATAACCAGGGCTAGAATTTCTCTTGAACCAGCACCAACGAAGGTGAAATGGATTAGGGTGTTGTACTCAGAATTCTCAGTATTTGCAATGGATCAAGAGTACTTAATATCACTTGAAAATACATTTGATTATGTTGAAGGGTTCGTGATCATAAACAGAACGGGCATTCTTAATAACTGGAGATCATCCTTTAATCCCAAAGATCCACTTCAAGCCAACCAATTCAATTCAGATGGCAGGACCTTCTACTGTCTTGAGGTGGCAAAATACTTCAACATAGACGAAAATGAAGCCATGAATCAGGAAGTTGAGCGACTGTTATCAGAACTGAGCTATATTCCGTCGACACTATTCCAATCAGAAGTTTCTTACGTGGATTTCCTGGACAGAGTACATGTTTCTGAGATGAAGCTAAGAGCCAAGGGCTTGTGGGAAGTTCCGCATCCATGGCTCAATCTTCTGATCCCAAGAAGCAGAATTCACGAGTTTGCACATGAGGTGTTTGAGATTCTTGTGGATACAAGCAACGGTCCCATTCTCATATATCCCGTAAATCAATCAAGATGGAACAACAGAACATCATTGGTTACACCAGAGGAAGAAGTTTTCTACCTGGTGGCATTTCTTTCTTCCGCCGTACCATTTTCGAAAGGGAAAGACAGTTTAGAATACATTCAAAGCCAAAACGAAAGGATCAAAGAGTTCTGCGAGCGAGCTCAGGTAGGAGCGAAGCAATATCTTGCACATTACAGAACAGGAGAAGAATGGGAAGGGCATTTTGGGAAAAGATGGCAAGTGATGAGACGAAGAAAATCAGAGTATGACCCATTGGCACTTCTTGGCCCTGGCCAGAGAATCTTTCAAAAGCCAATATTTTCCACTTTTGACTTATGTTTGTGA 1641 0.4211 MGFLPSDCFEHSKFLFFIFFIVVNLDCLPIKANLCSNNSVATPRNIPAYDILSSLQTLALDGYFSLEDNGHAAKDFGNIYHCPPLAILHPKAVSDISRTIKHIYETDAASELKIAARGHGHSLQGQAQAYQGLVVNMESLEGPEMTVDAGEFPYVDVSAGELWINILHETLKHGLAPKSWTDYLHLTAGGTLSNAGISGQAFRHGPQIDNIFQLEVVTGKGEMLTCSENQNADLFYGVLGGLGQFGIITRARISLEPAPTKVKWIRVLYSEFSVFAMDQEYLISLENTFDYVEGFVIINRTGILNNWRSSFNPKDPLQANQFNSDGRTFYCLEVAKYFNIDENEAMNQEVERLLSELSYIPSTLFQSEVSYVDFLDRVHVSEMKLRAKGLWEVPHPWLNLLIPRSRIHEFAHEVFEILVDTSNGPILIYPVNQSRWNNRTSLVTPEEEVFYLVAFLSSAVPFSKGKDSLEYIQSQNERIKEFCERAQVGAKQYLAHYRTGEEWEGHFGKRWQVMRRRKSEYDPLALLGPGQRIFQKPIFSTFDLCL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1080 546 Gene3D - 69 534 IPR016167 -
Alju01g1080 546 PANTHER GULONOLACTONE OXIDASE 47 535 - -
Alju01g1080 546 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 84 119 IPR006093 GO:0016491
Alju01g1080 546 SUPERFAMILY FAD-binding/transporter-associated domain-like 67 257 IPR036318 GO:0050660
Alju01g1080 546 FunFam Cytokinin dehydrogenase 2 261 493 - -
Alju01g1080 546 SUPERFAMILY FAD-linked oxidases, C-terminal domain 259 534 IPR016164 GO:0003824|GO:0050660
Alju01g1080 546 Gene3D - 261 493 IPR016170 -
Alju01g1080 546 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 259 534 IPR015345 GO:0009690|GO:0019139|GO:0050660
Alju01g1080 546 Pfam FAD binding domain 84 227 IPR006094 GO:0050660
Alju01g1080 546 Gene3D - 137 260 IPR016169 -
Alju01g1080 546 ProSiteProfiles PCMH-type FAD-binding domain profile. 80 258 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1080 Alju-ChrAlju01 8235657 8237734 Dispersed/Wgd