Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1078 ATGTTCAGTTCATCGCCATATATAGGGCTTGCCCACTCGGTACAATCGGAGCCATGTTCACTTTTGTTTAACTGGGTTAGCCGTCGGAGGCGTGGCGCCGTGAGGGTGGTGCCGGAAGCTCTGAAAATCAGGATGTCATTCTTGACTCGCCTCAACACTTTCGCAAGAAATCTCTCCTCCTCTCTCTTCTGCACCTCACTCCAGCATGGAAGTAGAGGTACAATAACCAGGATGGGCATGAAAACCCTCTCACTTTCTTCTGTAGTTGAAGCTTCAGATTTAGAATGCGACCAGATTGATGAGGATGTAAAGGCAACAGAGAAAGATTCTGCACTACGCTTAGCTGTTTCACAACTTGCTAATGAGTTTACCAGAGAATCAATGTTATCTTTGCGGAAATTTTTTTGTACACGTCGTGCACATGTGATTTCTACAGGCTCCCTGAAGCTGGACCTAGCTCTTGGGGTTGGAGGGTTACCAAAGGGTAGAATTGTGGAAATTTATGGACGAGAAGCAGCTGGCAAGACAACACTTGCACTTCAAGTTATAAAAGAAGCTCAGAAGCTTGGAGGATATTGTGCATATCTTGACGTAGAAAATGCATTGGACCTTTCACTTGTAGAATCAATGGGTGTAAATACTGAAAAACTTCTTGTCTCACATCCTGATTGTGCTGAAAACTTGTTGAGCATGGTGGATACATTGACAAAAAGTGGAGCTGTGGATGTGATTGTAATTGACAGTGTTGCTGCCCTTGTCCCACAACGTGAACTTGATCAATTAGGAGTTGTCTATAAGCGAGATTTTCTAAAGCAATTAATGACTCAAGCACTACGAAAAATTCATTATTCACTGTCTCACTCTCGAACTCTTATCATTTTCATTAATCAGGTTAGATTAAGTCCAAAATCAGGCCAGGCATATGGACCTGTTGAAGAGGTTACTTGTGGTGGAAATGCCTTAGGATTCTATGCAGCTGTGCGCTTGAGACTTTCAAGAATGGGGTTGTTGAAAACTGAGGATCAGCCAGAGGGTCTTGCAGTCTGCGTGCAGGTGGTAAAAAATAAACTGGCACCTGCAATGAAAAAGGCTGAACTGGGGATCAAGTTTGGAAGAGGATTTTGCCTTGAAACTGAGGTCATAGAGTTGGCTTGTGAGCGTGGAGCGATTGTGAAACAAGGAGACGGCTACCTTATTGAAGGTTTGTTTTTAGATAGTAAACTTGCAGCTGAACGTTATTTGGCTGAAAATGATGAGATTCTTGATAAATTGGTCGCGGACTTGAGGCAAGTTTTGTTTTAA 1302 0.4301 MFSSSPYIGLAHSVQSEPCSLLFNWVSRRRRGAVRVVPEALKIRMSFLTRLNTFARNLSSSLFCTSLQHGSRGTITRMGMKTLSLSSVVEASDLECDQIDEDVKATEKDSALRLAVSQLANEFTRESMLSLRKFFCTRRAHVISTGSLKLDLALGVGGLPKGRIVEIYGREAAGKTTLALQVIKEAQKLGGYCAYLDVENALDLSLVESMGVNTEKLLVSHPDCAENLLSMVDTLTKSGAVDVIVIDSVAALVPQRELDQLGVVYKRDFLKQLMTQALRKIHYSLSHSRTLIIFINQVRLSPKSGQAYGPVEEVTCGGNALGFYAAVRLRLSRMGLLKTEDQPEGLAVCVQVVKNKLAPAMKKAELGIKFGRGFCLETEVIELACERGAIVKQGDGYLIEGLFLDSKLAAERYLAENDEILDKLVADLRQVLF 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1078 433 Gene3D - 138 430 IPR027417 -
Alju01g1078 433 CDD RecA 142 375 IPR013765 GO:0003697|GO:0005524|GO:0006281
Alju01g1078 433 PANTHER RECA 95 432 IPR013765 GO:0003697|GO:0005524|GO:0006281
Alju01g1078 433 ProSiteProfiles RecA family profile 2. 305 379 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Alju01g1078 433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 372 IPR027417 -
Alju01g1078 433 Pfam recA bacterial DNA recombination protein 111 374 IPR013765 GO:0003697|GO:0005524|GO:0006281
Alju01g1078 433 PRINTS RecA protein signature 197 226 IPR013765 GO:0003697|GO:0005524|GO:0006281
Alju01g1078 433 PRINTS RecA protein signature 403 420 IPR013765 GO:0003697|GO:0005524|GO:0006281
Alju01g1078 433 PRINTS RecA protein signature 231 260 IPR013765 GO:0003697|GO:0005524|GO:0006281
Alju01g1078 433 PRINTS RecA protein signature 269 298 IPR013765 GO:0003697|GO:0005524|GO:0006281
Alju01g1078 433 PRINTS RecA protein signature 317 345 IPR013765 GO:0003697|GO:0005524|GO:0006281
Alju01g1078 433 PRINTS RecA protein signature 350 379 IPR013765 GO:0003697|GO:0005524|GO:0006281
Alju01g1078 433 ProSiteProfiles RecA family profile 1. 139 298 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Alju01g1078 433 SMART AAA_5 161 335 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1078 Alju-ChrAlju01 8201144 8206755 Transposed