Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1077 ATGCATAGGCCTGTCATTTGGAATAGTCATCGATCAGCTTGCCTTTCCCAATGCAGTTCTTGGCTTCTTGCATTCTTGCTTTTTGAGCATATTGATGTTCCTCCAAGTTGGAAGTGCTGGTTTGGATGGGTGAAAAGGCTCTTCACTCCTGAGTCAAAGGACAAAAAGCCAAAGAAATGGGGATGGAATCTTGGAAGGTTTAGGCTGAAACAATGCCCCACACTTACAGCACCAAATAGAGCACTTACCAAAGCAAGAGAAGAGCAGAGAAAGCATGCTTTGTCTGTGGCTATTGCAACAGCAGCTGCTGCAGAAGCTGCTGTTGCTGCTGCTCATGCTGCTGCTGCGGTTGTCCGGCTAACCGATTCTTCCCGTTCCTATTCTTATCTGTCCAAAGGCGACCAGAGCTTGGCTGCCATTAAAATTCAAAGCGCATACCGCGGACATCTTGCTAGGAAAGCATTGAGAGCATTGAAGGGAGTTGTGAGACTTCAAGCTATAGTTCGTGGTCAAGCCGTGAGACGTCAAGTGTTCAGCACTTCGAAGCATTTGCCTTCCAGTACAAGAGAGCTGGCAGAAATCCATGAAAGAAACAGTCTTACTGCAGGAAAAAGCTACAAGAATGACAAGAGCAATCAGTTTCCAAGGCAGAAAAAGAAGTTGGAAGAGAGGGAGATTAAGGAGACATTGCATCCTGATTGCCATGGTCAAAGGACTTGGAATTGCAGCTTGCATTCAAAAGAAGACATAGAAGCCATATGGTTGAGCAAACAAGAGGCCACAATCAAAAGAGAACGCATGAAACAGTATTCCTTCTCACACAGGGAGAGAAAAAATTCCCACATGCTAGAAGAATATGGGCCTGGTAAGGATTTTGGAAGAGAGAGCTGCCGTACACTGCGACAATGGCTGCAAGAAGAAACAATGAACAGGGATGTGTTTCACAAACCAGATCTTTTCTCAAAATCAAGAGATTCGACACAAGTCTCACTGAAGAGCGTGCAAAGAGAAGAGTCACAGGAAGGATTGATTTCACAGATTTCACTTCCAAGGAAATCATTTTCTCACATAAAGAAGGTGTCACTTGCAGATGATATTTCCATGCCAAATTCTCCAGTTTTCCCAACTTACATGGCTGTGACGGAATCTGCCAAGGCAAAGGCAAGATCTATAAGCACGCCAAGGCAAAGAACAGAGTTTCTGGAATTATTCCCCAATCAGAGTGAACCTCACAAGGAAGGCATATCTTTTTGGTCTTCTCGTTACGGTGCGCCTGCCAGCACCAATACAAACAATGAGGCCTTTTGGCAGAGATGTTAG 1320 0.4485 MHRPVIWNSHRSACLSQCSSWLLAFLLFEHIDVPPSWKCWFGWVKRLFTPESKDKKPKKWGWNLGRFRLKQCPTLTAPNRALTKAREEQRKHALSVAIATAAAAEAAVAAAHAAAAVVRLTDSSRSYSYLSKGDQSLAAIKIQSAYRGHLARKALRALKGVVRLQAIVRGQAVRRQVFSTSKHLPSSTRELAEIHERNSLTAGKSYKNDKSNQFPRQKKKLEEREIKETLHPDCHGQRTWNCSLHSKEDIEAIWLSKQEATIKRERMKQYSFSHRERKNSHMLEEYGPGKDFGRESCRTLRQWLQEETMNRDVFHKPDLFSKSRDSTQVSLKSVQREESQEGLISQISLPRKSFSHIKKVSLADDISMPNSPVFPTYMAVTESAKAKARSISTPRQRTEFLELFPNQSEPHKEGISFWSSRYGAPASTNTNNEAFWQRC 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1077 439 PANTHER IQ-DOMAIN 5-RELATED 43 424 - -
Alju01g1077 439 Pfam IQ calmodulin-binding motif 138 156 IPR000048 GO:0005515
Alju01g1077 439 ProSiteProfiles IQ motif profile. 159 186 IPR000048 GO:0005515
Alju01g1077 439 SMART iq_5 134 156 IPR000048 GO:0005515
Alju01g1077 439 Pfam Protein of unknown function (DUF4005) 369 407 IPR025064 -
Alju01g1077 439 ProSiteProfiles IQ motif profile. 135 163 IPR000048 GO:0005515
Alju01g1077 439 Gene3D - 134 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1077 Alju-ChrAlju01 8197820 8200407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1077 38 420 IQD Protein Family AT5G03960 44.444 1.56e-70 227