Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1069 ATGGCGCCAAAATCAGCACATTCGTCTCCAATCCCCATAGGTAACTGCGAGATTATCGTTGAGGCCAAAAGTTTCACCTGTAAGTCGGATTCAAACAGCCTCCAAATTTGTCTTCAAACAAGAGGGAAGATTAACGTTTCAGTTGTGAAAGGCGAAAATGATTCAGAGAATTTTAAGCTCGAAGAAAGAGATCATAAATTTGTCCTTGTTAATCCTAAAGATGCTGACAGCACTAGCAAATCCTACCTGCAGGAAGTATTGCAGATGTATATGACAGAACTCCCTGGAATGAATTATGCTGCAAATACCGGGAAGCAATCGAAATTTCTAGAAAGATGCGTAACTAATGGGAAATATCGTACACTGCTTCTGAAATCTGGTTCTGCTGGAAATTCTGGAAAGGTTATAGCTGCCATTACGTATCAAATAGTCCCTGCAGATACAGAGTATGCAGAGATCCCGCTGGCAGCGGTTTGTGCAATCCATCAACGCAAGGGTCTTGGTCATATGTTGTTTGTAGAGCTACGGAAGAGACTTCAACATGTTGGTATTCGTTCAATTTTCTGCTGGGGAGACAAAGAATCTGAAGGCTTTTGGCTTAAACAGGGTTTTATATCAATAGCAGAGGTGGACACCAAAGGTAGAGCTCGCAGGTTGCCTGTAAAAGCTGGTATTCGTAAAGCATTATGCTTTCCTGGCGGTTCTACTCTCATGGTTTGCCATCTAAGGATGGAATTTTCAGCTGATGCTACTAACCCTATGAAGTGTCTTCCCTCACAACAACATCCGAATCACTTGACATTTGGAAATGCTGAGAACGACCAGCTTAAATTTACAGGACAGTTACACGTTGATTTGAACTTTTCAAATAACTCTACTGATAGAACACATGATATGGAGAATAGCCATCCTAAGGCTTTGGTGAATGATGGATTTTCAAGTGAATTTGATAAATTGAGCAATAGTGACACACTTCCTGCTGTTGCAGGACTTGCAAACGATGGAGTTGATGCTGAAATGGAGGATTGTTCTAATTCCACGAAAGGTGCAAAGAGGATTTGGGAAGCCTCTTTGTCATCATTAAAGTCAAAAAGAGTGAAAGGAAGCCATTTAATTGATGGTAGATCTGAGTCTAGCTGGGGTTTTGTCTCAGAGGTTGATAGGACTAATTCTTGTTTTGTGGGATGCTCATGGGGCGTTTCAAGTGGAAGAAGTTCAATGGAGCTTCCATGTGACGAATCTTTGATTGTCCAAGAAAAGAATTCTGAGAAACTCAAAGGGGATTATTTACGGTTAGAAGCTAAAGTCAACAATGAACAGCTATCAACTAAACAATGCTTTAGAATCATGCTGATGAATATTGCTGATGATGCTAAGAAAACGCTCCTTACAAAGGTAATTGAATCCCTTGGTGGCACTGTCACCTCTGAAGGAAGCATGACCACACATGTTGTCACAGGCAAAGTGAGGAAAACTTTGAATTTCTGCACTGCCCTCTGCTCAGGGGCTTGGGTTGTCTCATCAGATTGGTTAAAAGAAAGCTGCCGTGAAGGAAAATTTGTTGATGAGTTGGCTTACATATTAAATGATGAGGATTATCAATTGAAGTACAGATCTGATTTAAAAAGTGCACTTTTCCGAGCAAGAGCCAACCCCCGAGCTTTGTTCAAGGGGTACAATGTGTGTATTGCAGATCATGTCCAACCTCCTGCTAAAACACTGTCTGCAATTGTGAGCTCTGCTGGTGGCAATGTTATTTGTGGGTTGAAGAAAGTAAATGAAGCATCCTCAACCATTTTTGTGACATGTGAAGAAGATATGGAAGAAGCAATGGTAGCTGCAAAGAAGGGGATCCGAACATTCAGTAGTGAGTGGTTTATGAACTGTGTCATGAGGCAGGAACTAGACATGGATGCCTTTCAATTTGCTGAGTCCTTGTGA 1941 0.4137 MAPKSAHSSPIPIGNCEIIVEAKSFTCKSDSNSLQICLQTRGKINVSVVKGENDSENFKLEERDHKFVLVNPKDADSTSKSYLQEVLQMYMTELPGMNYAANTGKQSKFLERCVTNGKYRTLLLKSGSAGNSGKVIAAITYQIVPADTEYAEIPLAAVCAIHQRKGLGHMLFVELRKRLQHVGIRSIFCWGDKESEGFWLKQGFISIAEVDTKGRARRLPVKAGIRKALCFPGGSTLMVCHLRMEFSADATNPMKCLPSQQHPNHLTFGNAENDQLKFTGQLHVDLNFSNNSTDRTHDMENSHPKALVNDGFSSEFDKLSNSDTLPAVAGLANDGVDAEMEDCSNSTKGAKRIWEASLSSLKSKRVKGSHLIDGRSESSWGFVSEVDRTNSCFVGCSWGVSSGRSSMELPCDESLIVQEKNSEKLKGDYLRLEAKVNNEQLSTKQCFRIMLMNIADDAKKTLLTKVIESLGGTVTSEGSMTTHVVTGKVRKTLNFCTALCSGAWVVSSDWLKESCREGKFVDELAYILNDEDYQLKYRSDLKSALFRARANPRALFKGYNVCIADHVQPPAKTLSAIVSSAGGNVICGLKKVNEASSTIFVTCEEDMEEAMVAAKKGIRTFSSEWFMNCVMRQELDMDAFQFAESL 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1069 646 ProSiteProfiles BRCT domain profile. 551 635 IPR001357 -
Alju01g1069 646 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 438 528 IPR001357 -
Alju01g1069 646 CDD BRCT_MDC1_rpt1 447 521 - -
Alju01g1069 646 CDD BRCT_PAXIP1_rpt6_like 555 636 - -
Alju01g1069 646 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 61 224 - -
Alju01g1069 646 SMART BRCT_7 553 633 IPR001357 -
Alju01g1069 646 SMART BRCT_7 441 518 IPR001357 -
Alju01g1069 646 SUPERFAMILY BRCT domain 545 635 IPR036420 -
Alju01g1069 646 Gene3D BRCT domain 553 645 IPR036420 -
Alju01g1069 646 ProSiteProfiles BRCT domain profile. 449 528 IPR001357 -
Alju01g1069 646 Gene3D - 64 218 - -
Alju01g1069 646 CDD NAT_SF 131 190 - -
Alju01g1069 646 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 94 211 IPR016181 -
Alju01g1069 646 Gene3D BRCT domain 433 552 IPR036420 -
Alju01g1069 646 SUPERFAMILY BRCT domain 448 530 IPR036420 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Alju01g1069 RTT107_BRCT_5 7.8e-07 CL0459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1069 01 8111363 8117799 Alju01g1069 01 8111363 8117799 ECH