Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1058 ATGCCGAGTTACGCCCCTCCGCTGCCTACTTCTTCCATGGGTACGGAAGGAAATTCTGTTCTTCCTTCCCGAATTTCTGAATTTGGAGGCATTGATCAATCTTTCGGATTTCGTGTGGAGGATGCTATCAATCTTAGCAGAAATCCAGTATTCAATCAAATGAAGTCAAACAACCAACCTCTGGGTGTTGATGTTCAGTTTGGCGCTTTAAATAAGACATTACCACTACAGAATGACTCAAATTCCAATCTGGCTTCTACATCTGGTGGCCAGCGTGAGAACTGGGGAGAGTCTAACATGGCAGATGCAAGCCCAAGGACTGACACTTCAACAGATGATACAGATGACAAAAATCAAAGGTCTGAGAGGGGTCAATTAGCTATTGGGGCCTCTGATTCCAGTGAGAGATCAAAAGATAAAACAGATCAGAAGACATTACGACGTCTAGCTCAAAATCGTGAAGCTGCTAGGAAAAGTCGGCTACGAAAAAAGGCATATGTGCAGCAATTAGAAAGTAGCAGGCTGAAACTGACTCAACTTGAGCAGGAGCTCCAACGAGCCCGCCAGCAGGGCATATTTATTTCAAGTATGGGAGATCAGTCTCATTCAATGAGTGGAAATGGTGCAATGACCTTTGATGTAGAGTATGCACGTTGGTTAGAAGAACATAACCGGCAGATAAATGAGCTAAGGGCTGCAGTCAATTCTCATGCTGGAGATATTGAACTTCGGACAATTGTTGACAATGTTATGTCACACTACGAAGAGATTTTCAAGCTTAAGGGTGTTGCAGCAAAAGCTGATGTCTTCCACATACTATCTGGAATGTGGAAAACACCAGCTGAGAGATGTTTCATGTGGATTGGAGGCTTTCGCTCATCTGAGCTTCTCAAGCTTCTTGGAAACCATTTGGAGCCATTGACAGAGCAACAGTTGATGAACATTTACAGCTTGCAACAGTCATCCCAACAGGCTGAAGATGCACTGTCCCAAGGAATGGATGCATTACAACAGTCATTAGCTGAGACTTTGGCTAATGAGTCATCCACCCCATCGGGGCCTTCAGGAAATGTGGCAAACTATATGGGGCAGATGGCTATGGCCATGGGGAAGCTGGGTACTCTTGAGGGGTTTCTTCGGCAGGCTGACAATCTACGACAGCAAACACTACAACAAATGTTGCGGATATTAACCACAAGGCAGTCGGCTCGAGCTCTTCTTGCAATAAGTGATTATTTCTCCAGGCTACGAGCCTTGAGTTCGCTGTGGCTTGCCAGGCCAAGGGAGTGA 1290 0.4543 MPSYAPPLPTSSMGTEGNSVLPSRISEFGGIDQSFGFRVEDAINLSRNPVFNQMKSNNQPLGVDVQFGALNKTLPLQNDSNSNLASTSGGQRENWGESNMADASPRTDTSTDDTDDKNQRSERGQLAIGASDSSERSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSMGDQSHSMSGNGAMTFDVEYARWLEEHNRQINELRAAVNSHAGDIELRTIVDNVMSHYEEIFKLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLGNHLEPLTEQQLMNIYSLQQSSQQAEDALSQGMDALQQSLAETLANESSTPSGPSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1058 429 Gene3D - 143 197 - -
Alju01g1058 429 Pfam Seed dormancy control 226 300 IPR025422 GO:0006351|GO:0043565
Alju01g1058 429 SMART brlzneu 140 203 IPR004827 GO:0003700|GO:0006355
Alju01g1058 429 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 142 186 IPR004827 GO:0003700|GO:0006355
Alju01g1058 429 PANTHER TRANSCRIPTION FACTOR TGA9 89 429 - -
Alju01g1058 429 FunFam BZIP family transcription factor 143 192 - -
Alju01g1058 429 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 147 162 IPR004827 GO:0003700|GO:0006355
Alju01g1058 429 Coils Coil 163 190 - -
Alju01g1058 429 MobiDBLite consensus disorder prediction 74 146 - -
Alju01g1058 429 MobiDBLite consensus disorder prediction 74 107 - -
Alju01g1058 429 Coils Coil 220 240 - -
Alju01g1058 429 SUPERFAMILY Leucine zipper domain 144 187 IPR046347 GO:0003700|GO:0006355
Alju01g1058 429 CDD bZIP_HBP1b-like 144 196 - -
Alju01g1058 429 ProSiteProfiles DOG1 domain profile. 209 426 IPR025422 GO:0006351|GO:0043565
Alju01g1058 429 MobiDBLite consensus disorder prediction 108 122 - -
Alju01g1058 429 Pfam bZIP transcription factor 144 184 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1058 Alju-ChrAlju01 7989087 7993018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1058 100 429 bZIP Transcription Factor Family AT3G12250 77.341 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Alju01g1058 DOG1 3.5e-32 No_clan