Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1045 ATGGGAATGGCCTGTGAGTCCCAATTTCATGTGCTGGCCGTCGATGACAGCCTAATCGATCGGAAGCTTATTGAGAGGCTCCTCAAAACCTCCTCCTATCAAGTTACCACTGTTGATTCCGGTAGCAAGGCTTTAGAGTTTCTGGGTTTGCGTGACAATGATCAGACCGACCCTAATACACCCTCCGTTTCTCCTCACAGTAATCAGGAAGTGGATGTGAACCTTGTTATTACAGACTACTGTATGCCTGGCATGACTGGCTATGACTTACTCAAGAAAATCAAGGAATCTTCGTCTTTGAGAAACATACCAGTGGTGATTATGTCATCCGAAAATGTGCCTTCCAGGATTAGCAAGTGCTTAGAAGAAGGTGCAGAGGAATTTTTCTTGAAACCAGTGAAGCCAGCTGATCTAAATAAGCTTAGACCTCATATGATGAAGACCCAGAAATTGAAGGATCAAGCACAAAAAAGAGATGAAAAGCTTGAAACCCCAGAGATTCAACTAGCACCACAATCACCAGTAGAACAACAGCATCAACAGTCTGTGCAGATAGTCAATACTAACAAGAGGAAAACTGTGGAAGAGGGGCTTTCGCTTGAAACTGATAGAACAAGAACAAGATACAATGGCGTAGCCACTATGGTCTGA 651 0.4363 MGMACESQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLRDNDQTDPNTPSVSPHSNQEVDVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISKCLEEGAEEFFLKPVKPADLNKLRPHMMKTQKLKDQAQKRDEKLETPEIQLAPQSPVEQQHQQSVQIVNTNKRKTVEEGLSLETDRTRTRYNGVATMV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1045 216 CDD REC_typeA_ARR 11 141 - -
Alju01g1045 216 SMART REC_2 9 142 IPR001789 GO:0000160
Alju01g1045 216 SUPERFAMILY CheY-like 8 163 IPR011006 -
Alju01g1045 216 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 192 IPR045279 GO:0009736
Alju01g1045 216 Pfam Response regulator receiver domain 11 140 IPR001789 GO:0000160
Alju01g1045 216 Gene3D - 10 212 - -
Alju01g1045 216 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1045 Alju-ChrAlju01 7837770 7839076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1045 1 216 Response Regulator Gene Family AT3G57040 63.223 3.32e-95 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju01g1045 Response_reg 1.7e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1045 01 7837770 7839076 Alju01g1045 01 7837770 7839076 ECH