Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1025 ATGAACTGTCACTCACAGCTTGCTGTGACAAGTCCCTCTAATCTCACTCTCTCCTTCAAATTCATTACCAAAATATTGGACGTCTCATTGGCAGGTTCTGACGATTTTAGCCGAAGCACTCAGCAGTCAGCAGTGCAACTCAGCAGTCCCCTGGAAATTTTCGATTCTTCAGCTAAAGAAGACCACGGGAACTTGGAGGAGACGGTGTTAGAAACCCCTGTGGTCATGCCTTACCTTGTCCGAGAGAAATTATTTATTGGTAATATCAGTGATGCTGCGGAGATACTTCAAAATGGTAGCGATGAAATCACTCATATTTTATCGGTTCTTAGCTCTGTTTCAATTTCATTCTTTTCCGAATGGCGAAGTAGCCTAACGATCCCGGCAAAGGAAATTAAGAAGGTATATGTGGGTGGTGGTCATGGTGGTGATGACGACTTGGGTGATATATCAAGGAGTCCGTTGTCACCGGACAACCTTTTGTACTCGTTGGAATATGCAGGTAAGGATTTGAAGTTGGTCAGGATGGCTGTCCCTCTGAGGGATACAGAAAATGAAAATATCTTGGATTACTTGGATGTTTGCCTCAATTTTATTGATCGAAGTAGGAAAGATGGTTCTGTTTTGGTGCACTGCTTTGCTGGAGTATCAAGAAGTGCAGCAATCATTACAGCTTATCTGATGAGATCTGAACATCTATCTCAAGAAGATGCCCTTCAATCATTAAGGAAGAGCTGTGAATTTGTTTGCCCAAATGATGGTTTTCTAGAACAGTTAAAAATGTTTGAGGAGATGGGCTTTAAGGTAGATCGCTCTAGCTCTATGTACAGGCGCTTTCGCTTGAAAGTATTGGGTGAGAATTATAACTCGGGGGTGAGAATAGAGAGTTCTAGACTTGGAGCTGATCCTGGCATGCCTGTTAGTGTTGCTTCAGAAGTAGGAGGAGCTCCAAGAGCAGGAAATAATCGCAGTCCTACATATCGCTGTAAGAAGTGCCGGCGTGTGGTTGCATTGAAGGAACATGTTGTAGACCATGTTCCCGGTGAAGGTGAGACATCCAGCGAGTGGCACAAGTGGAAAAGTGACAGCCTCTTTAACAAATACAATGAATCTGAGTGTTCTTCCATATTTATTGAGCCACTACAATGGATGAAAGCAGTTGAGGAAGGTGCATCGGAGGGGAAGTTGAGCTGTGCCCATTGTGACGCCCGCTTGGGAAACTTTAATTGGTTTGGCATACAATGCAGCGGCGGAAGCTGGATAACCCCTGCCTTTCAGATCCACAAGTCCCGCGTGGACGCCAGCCCTCTCTAA 1314 0.4475 MNCHSQLAVTSPSNLTLSFKFITKILDVSLAGSDDFSRSTQQSAVQLSSPLEIFDSSAKEDHGNLEETVLETPVVMPYLVREKLFIGNISDAAEILQNGSDEITHILSVLSSVSISFFSEWRSSLTIPAKEIKKVYVGGGHGGDDDLGDISRSPLSPDNLLYSLEYAGKDLKLVRMAVPLRDTENENILDYLDVCLNFIDRSRKDGSVLVHCFAGVSRSAAIITAYLMRSEHLSQEDALQSLRKSCEFVCPNDGFLEQLKMFEEMGFKVDRSSSMYRRFRLKVLGENYNSGVRIESSRLGADPGMPVSVASEVGGAPRAGNNRSPTYRCKKCRRVVALKEHVVDHVPGEGETSSEWHKWKSDSLFNKYNESECSSIFIEPLQWMKAVEEGASEGKLSCAHCDARLGNFNWFGIQCSGGSWITPAFQIHKSRVDASPL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1025 437 FunFam Dual specificity protein phosphatase 12-like 79 285 - -
Alju01g1025 437 Gene3D Protein tyrosine phosphatase superfamily 79 285 IPR029021 -
Alju01g1025 437 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 77 268 IPR029021 -
Alju01g1025 437 SMART dsp_5 76 265 IPR020422 GO:0006470|GO:0008138
Alju01g1025 437 Pfam Dual specificity phosphatase, catalytic domain 172 264 IPR000340 GO:0008138|GO:0016311
Alju01g1025 437 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 76 434 - -
Alju01g1025 437 ProSiteProfiles Dual specificity protein phosphatase domain profile. 76 268 IPR020422 GO:0006470|GO:0008138
Alju01g1025 437 ProSitePatterns Tyrosine specific protein phosphatases active site. 210 220 IPR016130 GO:0016311|GO:0016791
Alju01g1025 437 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 189 244 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1025 Alju-ChrAlju01 7685966 7691003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1025 150 264 Protein tyrosine phosphatase (PTP) family AT3G06110 31.897 9.07e-16 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1025 01 7685966 7691003 Alju01g1025 01 7685966 7691003 ECH