Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1022 ATGCAGCCGCAGCAGATGGAGAACTCAGAGCTCTACCAATTCCTCGCCGGCAACGGCGCTTCCTTCTTCACCCCCGCATCGTACGGCCTGCCTCCTCCTGCTGCAGCCGCCTCCACAATGCACAGTTTCTGCAGTTCCTCTTATTACCCCTTGGATTCCTCCGAAATTACTGATACACCCCACCAAGATAGAGCCCTCGCTGCCCTCAAGAATCACAAGGAGGCTGAGAAGCGCAGGCGAGAGAGGATCAATTCCCACCTTGATAAGCTTCGCACTCTTCTTCCCTGTAATTCTAAGACTGACAAGGCCTCGCTTCTAGCAAAGGTTGTCCAACGAGTGAGAGAGCTAAAACAGCAAACTTCACAAATCACCGAACTCGAAACCATTCCTTCAGAGACAGACGAAATCACCGTCCTCTCCACTAGCGGCGACTACGGCGGCGGCGGAGACGGCAGGCTCATATTCAAAGCCTCCTTATGCTGCGAAGATCGCTCCGATCTCATACCTGATCTCATTGAAATCCTAAAGTCGCTGCATCTCAAAACCCTCAAAGCAGAAATGGCAACACTAGGAGGAAGAACCCAAAACGTCCTTATCGTGGCCGCCGACAAAGACCACAGCATCGAATCAATCCACTTCCTCCAGAACGCATTGAAATCTTTGCTCGAACGCTCCAATTCAAACGAAAGATCCAAACGACGTCGTGTACTGGACCGCAAATTGATTGGCTGA 732 0.515 MQPQQMENSELYQFLAGNGASFFTPASYGLPPPAAAASTMHSFCSSSYYPLDSSEITDTPHQDRALAALKNHKEAEKRRRERINSHLDKLRTLLPCNSKTDKASLLAKVVQRVRELKQQTSQITELETIPSETDEITVLSTSGDYGGGGDGRLIFKASLCCEDRSDLIPDLIEILKSLHLKTLKAEMATLGGRTQNVLIVAADKDHSIESIHFLQNALKSLLERSNSNERSKRRRVLDRKLIG 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1022 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 116 IPR011598 GO:0046983
Alju01g1022 243 Pfam Helix-loop-helix DNA-binding domain 71 116 IPR011598 GO:0046983
Alju01g1022 243 Gene3D - 62 128 IPR036638 GO:0046983
Alju01g1022 243 PANTHER TRANSCRIPTION FACTOR BHLH30 48 238 IPR045847 GO:0003700|GO:0006355
Alju01g1022 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 127 IPR036638 GO:0046983
Alju01g1022 243 FunFam transcription factor bHLH30 62 125 - -
Alju01g1022 243 SMART finulus 73 122 IPR011598 GO:0046983
Alju01g1022 243 CDD bHLH_AtAIG1_like 62 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1022 Alju-ChrAlju01 7661664 7663208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1022 1 226 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 62.869 1.17e-86 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju01g1022 HLH 2.1e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1022 01 7661664 7663208 Alju01g1022 01 7661664 7663208 ECH