Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1015 ATGGCATCGAGCTCAATGTCATCCTCTGGTTCATGGAGTGCTCAGGAGAACAAAGCCTTTGAAAGGGCTCTTGCTGTTTATGACAAGGACACTCCTGATCGTTGGTACAACGTTGCCAGGGCTGTTGGTGGGAAAACACCAGAGGAGGTGAAGAGGCACTATGAGATTCTCGTCCGAGACGTTCACTATATAGAATCTGGGAGAGTGCCATTCCCCAGTTACAAGAAAAGTGCAGCCTTTGATGACCAGAAAAGGCTGAAAAACCTGCAGCTCCAGTGA 279 0.4875 MASSSMSSSGSWSAQENKAFERALAVYDKDTPDRWYNVARAVGGKTPEEVKRHYEILVRDVHYIESGRVPFPSYKKSAAFDDQKRLKNLQLQ 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1015 92 CDD SANT 14 54 IPR001005 -
Alju01g1015 92 Gene3D - 2 71 - -
Alju01g1015 92 FunFam Transcription factor SRM1 4 71 - -
Alju01g1015 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Alju01g1015 92 SMART sant 8 60 IPR001005 -
Alju01g1015 92 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Alju01g1015 92 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Alju01g1015 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 83 IPR044636 GO:0003700
Alju01g1015 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1015 Alju-ChrAlju01 7583682 7584052 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju01g1015 Myb_DNA-binding 1.7e-06 CL0123