Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1011 ATGGCTTCAAGACCCATCGTTCCCCAACAGGCCAGAGGTGATGCAGTCGTACATGGAGGTAAGCAGCAAAAGAAGAATCCAGCGGCAGAAGGAAGAAATCGCAGAGCACCGCTGGGCGACATTGGAAATTTGGTGAATGTAAAAGGAGTAGAAGTCAAGCCTAACCGCCCAATCACGAGGAGTTTCTGTGCCCAATTACTTGCTAATGCCCAGGCTGCAACAGCTGCAGACAACAACAAGAAACAAGCTTGTGCTAAGGTGGATGCACCTCTTCCTGTCATTGATGGAGTTGTAGCTGCAAAGAGAGTCGCACCAAAGCCGACTCAGAGGAAAGTCACCGCTAAACCAAAGCCAGAGGAAGTCATTGACATAAGCTCAGATGAAGAAAAGGTTGAGAAAGACAAGTCTGCGAACAAGAAAAAGGAAGGAGACGCAAACTCTAAGAAGAAATCACGAACTCTTACTTCAGTACTCACTGCTCGAAGCAAAGCTGCATGTGGTCTTACTAAGAAGCCAAAGGAGCAAATTGTTGACATAGACGCAGCAGACACTGAAAATGAACTTGCTGCTGTTGAATACATAGATGAAATTTACAAGTTTTACAAGCTAGTGGAGCATGAGAATCGCCCTCACGATTACATGGACTCACAGCCTGAACTGAATGAGAGGATGAGAGCTATATTGGTCGATTGGCTGATAGATGTGCACAGAAAGTTCGACCTCTCACTTGAGACTCTTTATCTCACCATCAATATAATTGATCGTTTTCTGGCCATCAAGACCGTGCAAAGGAGGGAGCTACAATTGGTAGGGATCGGTGCCATGCTCATGGCATCTAAGTATGAAGAAATATGGCCACCTGAGGTTAATGATTTTGTATGCCTCTCAGACAGAGCTTACACTCACGAACAGATATTAGTGATGGAGAAAACCATTCTAAACAAGCTGGAGTGGTATCTGACTGTGCCCACTACTTACGTTTTCCTTGTTCGTTTCATCAAGGCTTCAATTCCTGATGAGAAGTTAGAGAACATGGTGTATTTTCTGTCTGAGTTGGGTGCCATGCATTATGCCACCATAATGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTGTTGGCAGCTCGTTGCACTCTAAACAAGAACCCCACTTGGAGTGACACACTAAAGCTTCACACCGGATACTCAGAAGCACAACTCATGGATTGTGCTAGATTACTTGTGAGCTTCCACTCAACGGCTGGGAATGGAAAGCTTCAAGTTGTGTACAGAAAATACTCGGATCCCGACAGAGGAGCCGTGGCATTGCTTCCTCCGGCGAGGAATCTCACGCCTGAAGAAGACTCTGCTGCTAGATAG 1359 0.4592 MASRPIVPQQARGDAVVHGGKQQKKNPAAEGRNRRAPLGDIGNLVNVKGVEVKPNRPITRSFCAQLLANAQAATAADNNKKQACAKVDAPLPVIDGVVAAKRVAPKPTQRKVTAKPKPEEVIDISSDEEKVEKDKSANKKKEGDANSKKKSRTLTSVLTARSKAACGLTKKPKEQIVDIDAADTENELAAVEYIDEIYKFYKLVEHENRPHDYMDSQPELNERMRAILVDWLIDVHRKFDLSLETLYLTINIIDRFLAIKTVQRRELQLVGIGAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILVMEKTILNKLEWYLTVPTTYVFLVRFIKASIPDEKLENMVYFLSELGAMHYATIMYCPSMVAASAVLAARCTLNKNPTWSDTLKLHTGYSEAQLMDCARLLVSFHSTAGNGKLQVVYRKYSDPDRGAVALLPPARNLTPEEDSAAR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1011 452 MobiDBLite consensus disorder prediction 1 37 - -
Alju01g1011 452 SUPERFAMILY Cyclin-like 185 320 IPR036915 -
Alju01g1011 452 Pfam Cyclin, C-terminal domain 323 439 IPR004367 -
Alju01g1011 452 Gene3D - 196 435 - -
Alju01g1011 452 MobiDBLite consensus disorder prediction 112 149 - -
Alju01g1011 452 Gene3D - 210 321 - -
Alju01g1011 452 Pfam Cyclin, N-terminal domain 196 320 IPR006671 -
Alju01g1011 452 PANTHER CYCLINS 142 428 IPR039361 -
Alju01g1011 452 PIRSF Cyclin_A_B_D_E 1 451 IPR046965 GO:0016538|GO:0044772
Alju01g1011 452 SMART cyclin_7 230 314 IPR013763 -
Alju01g1011 452 SMART cyclin_7 327 409 IPR013763 -
Alju01g1011 452 CDD CYCLIN_AtCycB-like_rpt2 323 439 - -
Alju01g1011 452 FunFam G2/mitotic-specific cyclin-1 311 435 - -
Alju01g1011 452 SMART Cyclin_C_2 323 440 IPR004367 -
Alju01g1011 452 CDD CYCLIN_AtCycB-like_rpt1 173 318 - -
Alju01g1011 452 SUPERFAMILY Cyclin-like 322 441 IPR036915 -
Alju01g1011 452 MobiDBLite consensus disorder prediction 105 154 - -
Alju01g1011 452 ProSitePatterns Cyclins signature. 225 256 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1011 Alju-ChrAlju01 7539134 7541664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1011 1 450 Core Cell Cycle Gene Families AT4G37490 54.915 3.52e-154 442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1011 01 7539134 7541664 Alju01g1011 01 7539134 7541664 ECH