Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1009 ATGCCTTCAAAGGGAAAAAAGCATGGCAAGACACAATCGAGGCTATCCACTTCTGAAGTGGCCTCTCCTCGTACACCATCACTGACTCCTAACAGAGATTCAGATTTGAGTGAAGAAGAACTTATCCTTTCATGTGAAGAAGCTTCAAAAATATTCCCGCCTTTCATTGGTAAATCTGCTTTTGTTGGCGATATCAGTGCTGTGGAGCTGAAATCCAAAGGCTGTAAAATTTGGCTTTCTGAGTCTTCCATGGTTTCTTCTTCCCTTGCCCCTGGTTCCATTGTGTCGGCGTCAATTCCATATTCAAGAAGGGAAAATCTGGATTCAGATAGCTTTCCTCTTAAATCATTAACGAAAGAATGTGCTATATGCTATGGACTGGATTCTGGGAACACTTCAGTTGATGGCGCAGGAAACTACTTTGCTCTTGCAACAGTTTTTCCGTCTAGCAAGGTTTTGAAGAATGGAGTACAAATTTCATCAGAGCTTTCTTATACCATGGGATGTCCTACTATTGGTACTCATGTGTTCGTTTATCCAGTGCAGAATCAATGCCTATTTTCTTTCGTAAATGAGAAAAATGAACCACATTCTATAGAAGATAATAGTCTGGTGGTGTATAATTGCAAGGAATTGTATCTTCAGTTGGCTCCTTTGAAGAATGGATTACCCATGAAAATCAGTAACATATCACCAATGGGCTTGTCTGCAGCAAAATCCCATCTTCAATTTGGGGTTGAAAATGTTACTTCTCCTAAAACACCTTCTAATGGATTGAAATTGTCTAGTTTGAGTGATTTATCTTCACCTATATTTGAAGATTCTTCTTCTAACGTACCTAATCAAAAGAGCCAATCACTGATTTCATTTGATCTAAGGGAGGCATTGGGGGATGAAAGCTCCAAAAAACTACTGCAGACATGTGCAGCGTCATGGCTGTATTCTCGTTGGTTACTGCTAGGGAATATTGTGACCATACAAATATTTTCAGAGCTGTGCATTTTTCAAGTTGTAGGGGCTAAAAGGTTGTCAGTAGACCGATCTATTCCTGATTCATCAAGTGAAAGTGGTTCTTCATACACAGAGGGTCCTGACATATCAGAGCATATAAATCAGGCTATCATTGTCAACCATGAAACAAAGGTATCTTTATCTTTGCCATCAAATGTGACTTCTGATGAGCTGATTCAAAGAGATTTGTCTAAGGTGGAACTCACGGAGAAGGGCATTAAGTCTAGTGTACCTAATAATGTTTCAAAATTGGGTGGTCTTTCTAAAGAATATGCAGTTTTGAAGGATATAATTCTGTCTTCAGTAAAAAATGATCTACTAAGTAACTTTGGGTTACGAACTACAAAAGGCGTCCTTCTTCATGGTCCTCCTGGCACAGGAAAATCTTCCCTAGCTCAATTATGTGCTCATGATGTGGGGGTCAATATTTTCCAGATAAATGGACCTGAAATTGTAGGCCAATATTATGGTGAAAGTGAGCAAGCATTGCACGAAGTTTTTGATTCTGCCATTCAGGCTGCACCTGCAGTGGTATTTATTGATGAGTTGGATGCTATTGCCCCTGCAAGGAAAGATGGTGGTGATGAGCTTTCTCAGAGAATGGTAGCAACCTTATTGAATCTTATGGATGGAATTTGTAGAACTGAAGGATTACTTGTTATTGCTGCCACCAACAGACCTGACAATATTGAGCCTGCTCTGAGGCGACCTGGAAGATTTGACAAGGAAATTGAAATTGGCGTGCCATCTCCTTACCAACGGTTGGATATGTTGCTCACTCTTCTCAGCGAAGTGGATCACACTCTTACAGAGATACAAATTGAAAATCTCGCCACTGTCACACATGGTTTTGTGGGTGCTGATCTAGTTGCCCTTTGCAAAGAAGCAGGCTTGGTTTGTCTTAGACGTTATTTTAATTTTAAGAAGGATTGGCATAATTGCTGCTATGATGGAACATCCTCACAATATAAAGGTCAGCAACCTGCTTTGCTGAAGGGTGCAGAAGACTCAAGAGATCATTCTGGCCATTCAACTTCATCTGTTTCAGAGTTATCAGTGGCTTCAAACTCTTTGCTGCCTTCTTGCATGATAGGTTCAACTGCTGACTATAAAGACATAGTTCCTGATAGGGGTGAAGATCATAATTTGAAAGTAACTTGTGAAGATTTTCACAAGGCAAGAATGATAATAAGACCCAGTGCCATGAGAGAGGTAATCCTGGAGGTTCCCAAGGTTAAGTGGGAAGATGTTGGGGGCCAAAAAGATGTCAAGGCCCAACTGATGGAAGCAGTAGAATGGCCCCAGAAGCACCATGATGCATTGAAGCGTATTGGAACTCACCCTCCAAAAGGTGTGTTGATGTTTGGGCCTCCAGGTTGTAGCAAAACTCTTATGGCACGTGCAGTTGCTTCTGAAGCTGCACTGAACTTTCTGGCTGTCAAGGGTCCGGAACTCTTCAGTAAATGGGTAGGTGAATCTGAGAAGGCTGTCAGATCTTTGTTTGCAAAAGCAAGGGCCAATGCCCCATCTATTGTATTTTTTGATGAAATAGACGGCCTTGCTGTTACAAGGGGGAAGGAAAGTGATGGGGTTTCAGTGTCAGATAGAGTCATGAGTCAACTTCTAGTTGAATTGGATGGTCTGCATGAAAGAGCTAATGTCACTGTCATTGCTGCTACAAATAGGCCAGACAAGATTGATCCTGCCCTTTTAAGACCAGGACGCTTTGACCGTCTGCTGTATGTGGGACCTCCAAATGAGATAGACAGAGAAGAGATATTCCGCATCCACTTGCATAAAATTCCATGTGGTTCTGATGTAAGCCTGAAAGAACTGGCTTCTCTTACAGATGGTTGTACTGGTGCTGATATATCACTAATATGCCGGGAGGCAGCTGTTGCAGCTATTGAGGAGAGCCTTAATGCTTCTGCAATAACGATGAAGCATTTGAAGACGGCAATTAAACAGGTCCAGCCAACAGAGAATCAGTCTTACCAACAGTTGTCAGCTAAATTTCAAAGGGCTGTTGGCACCTGTGATGTAAAACATGAGGACAGCAATATGCAATGCGCAAACAGATCTACTTGGCCCTCCGTTGGGAAGTTCATAAGATCTGTCAAATTGTTTCTCTATCGGATATCAGTGGCCATTTTTATTTGA 3171 0.4163 MPSKGKKHGKTQSRLSTSEVASPRTPSLTPNRDSDLSEEELILSCEEASKIFPPFIGKSAFVGDISAVELKSKGCKIWLSESSMVSSSLAPGSIVSASIPYSRRENLDSDSFPLKSLTKECAICYGLDSGNTSVDGAGNYFALATVFPSSKVLKNGVQISSELSYTMGCPTIGTHVFVYPVQNQCLFSFVNEKNEPHSIEDNSLVVYNCKELYLQLAPLKNGLPMKISNISPMGLSAAKSHLQFGVENVTSPKTPSNGLKLSSLSDLSSPIFEDSSSNVPNQKSQSLISFDLREALGDESSKKLLQTCAASWLYSRWLLLGNIVTIQIFSELCIFQVVGAKRLSVDRSIPDSSSESGSSYTEGPDISEHINQAIIVNHETKVSLSLPSNVTSDELIQRDLSKVELTEKGIKSSVPNNVSKLGGLSKEYAVLKDIILSSVKNDLLSNFGLRTTKGVLLHGPPGTGKSSLAQLCAHDVGVNIFQINGPEIVGQYYGESEQALHEVFDSAIQAAPAVVFIDELDAIAPARKDGGDELSQRMVATLLNLMDGICRTEGLLVIAATNRPDNIEPALRRPGRFDKEIEIGVPSPYQRLDMLLTLLSEVDHTLTEIQIENLATVTHGFVGADLVALCKEAGLVCLRRYFNFKKDWHNCCYDGTSSQYKGQQPALLKGAEDSRDHSGHSTSSVSELSVASNSLLPSCMIGSTADYKDIVPDRGEDHNLKVTCEDFHKARMIIRPSAMREVILEVPKVKWEDVGGQKDVKAQLMEAVEWPQKHHDALKRIGTHPPKGVLMFGPPGCSKTLMARAVASEAALNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDGLAVTRGKESDGVSVSDRVMSQLLVELDGLHERANVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNEIDREEIFRIHLHKIPCGSDVSLKELASLTDGCTGADISLICREAAVAAIEESLNASAITMKHLKTAIKQVQPTENQSYQQLSAKFQRAVGTCDVKHEDSNMQCANRSTWPSVGKFIRSVKLFLYRISVAIFI 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1009 1056 Pfam ATPase family associated with various cellular activities (AAA) 455 584 IPR003959 GO:0005524|GO:0016887
Alju01g1009 1056 Pfam ATPase family associated with various cellular activities (AAA) 789 920 IPR003959 GO:0005524|GO:0016887
Alju01g1009 1056 FunFam spermatogenesis-associated protein 5-like protein 1 922 1007 - -
Alju01g1009 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 415 640 IPR027417 -
Alju01g1009 1056 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 747 1002 IPR027417 -
Alju01g1009 1056 FunFam Putative vesicular transport protein (CDC48) 405 584 - -
Alju01g1009 1056 MobiDBLite consensus disorder prediction 664 684 - -
Alju01g1009 1056 CDD RecA-like_CDC48_NLV2_r1-like 420 583 - -
Alju01g1009 1056 FunFam calmodulin-interacting protein 111 isoform X1 746 921 - -
Alju01g1009 1056 PANTHER AAA-FAMILY ATPASE 80 1011 - -
Alju01g1009 1056 SMART AAA_5 785 923 IPR003593 GO:0016887
Alju01g1009 1056 SMART AAA_5 451 587 IPR003593 GO:0016887
Alju01g1009 1056 Gene3D - 922 1007 - -
Alju01g1009 1056 MobiDBLite consensus disorder prediction 1 36 - -
Alju01g1009 1056 CDD RecA-like_CDC48_r2-like 760 919 - -
Alju01g1009 1056 Gene3D - 750 1013 IPR027417 -
Alju01g1009 1056 ProSitePatterns AAA-protein family signature. 891 909 IPR003960 GO:0005524|GO:0016887
Alju01g1009 1056 MobiDBLite consensus disorder prediction 14 32 - -
Alju01g1009 1056 FunFam Calmodulin-interacting protein 111 586 749 - -
Alju01g1009 1056 Gene3D - 399 584 IPR027417 -
Alju01g1009 1056 Pfam AAA+ lid domain 943 988 IPR041569 -
Alju01g1009 1056 Pfam AAA+ lid domain 609 642 IPR041569 -
Alju01g1009 1056 Gene3D - 586 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1009 Alju-ChrAlju01 7529304 7537767 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1009 1 1049 Calmodulin-binding Proteins AT3G56690 56.822 0.0 1041